AIM33 (YML087C)


Gene profile

Gene name: AIM33
Reference locus (S288C): YML087C
Gene biotype: protein_coding

Description: Uncharacterized oxidoreductase AIM33; Protein of unknown function, highly conserved across species; homolog of human CYB5R4; null mutant displays reduced frequency of mitochondrial genome loss; AIM33 has a paralog, PGA3, that arose from the whole genome duplication

Top 10 interactors (score): CYB5 (0.762); YIG1 (0.731); IRC21 (0.691); AIM32 (0.651); OLE1 (0.632); CYB2 (0.63); YML083C (0.61); URA1 (0.609); YML082W (0.598); DUS1 (0.574); YTP1 (0.573); ALO1 (0.569); SCS7 (0.564); RPM2 (0.552); SHE9 (0.521); DPH1 (0.52); YJL045W (0.505); UFO1 (0.499); ARH1 (0.497); SHH4 (0.489)

Homologues (species, bitscore): CYB5R1 (Homo sapiens, 154.5); Cyb5r1 (Mus musculus, 158.3); cyb5r1 (Danio rerio, 149.1); cyb5r2 (Xenopus tropicalis, 162.2); CG5946 (Drosophila melanogaster, 140.2); hpo-19 (Caenorhabditis elegans, 147.9); AT5G20080 (Arabidopsis thaliana, 174.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:88150-89088:- gene-YML087C_AKU4011 rna-NM_001182446.1_AKU4011 cds-NP_013623.1_AKU4011 99.5 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:387091-388029:+ gene-YML087C_BG1 rna-NM_001182446.1_BG1 cds-NP_013623.1_BG1 99.3 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:94320-95258:- gene-YML087C_Bruggeman rna-NM_001182446.1_Bruggeman cds-NP_013623.1_Bruggeman 99.2 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:95964-96902:- gene-YML087C_CAT1 rna-NM_001182446.1_CAT1 cds-NP_013623.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:88153-89091:- gene-YML087C_CBS1585 rna-NM_001182446.1_CBS1585 cds-NP_013623.1_CBS1585 99.5 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:94088-95026:- gene-YML087C_CBS436 rna-NM_001182446.1_CBS436 cds-NP_013623.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:88868-89806:- gene-YML087C_CBS6412 rna-NM_001182446.1_CBS6412 cds-NP_013623.1_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:87340-88278:- gene-YML087C_CBS6413 rna-NM_001182446.1_CBS6413 cds-NP_013623.1_CBS6413 99.5 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:89150-90088:- gene-YML087C_CENPK1137D rna-NM_001182446.1_CENPK1137D cds-NP_013623.1_CENPK1137D 99.3 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:88429-89367:- gene-YML087C_EthanolRed rna-NM_001182446.1_EthanolRed cds-NP_013623.1_EthanolRed 100.0 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:88938-89876:- gene-YML087C_FaliES1 rna-NM_001182446.1_FaliES1 cds-NP_013623.1_FaliES1 100.0 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000345.1:385-1323:+ gene-YML087C_JAY291 rna-NM_001182446.1_JAY291 cds-NP_013623.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:92841-93779:- gene-YML087C_MUCL30387 rna-NM_001182446.1_MUCL30387 cds-NP_013623.1_MUCL30387 99.2 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:95991-96929:- gene-YML087C_MUCL30388 rna-NM_001182446.1_MUCL30388 cds-NP_013623.1_MUCL30388 99.2 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:88167-89105:- gene-YML087C_MUCL39482 rna-NM_001182446.1_MUCL39482 cds-NP_013623.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:92899-93837:- gene-YML087C_MUCL42920 rna-NM_001182446.1_MUCL42920 cds-NP_013623.1_MUCL42920 99.2 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:94385-95323:- gene-YML087C_NCIM3186 rna-NM_001182446.1_NCIM3186 cds-NP_013623.1_NCIM3186 98.7 100.0 Verified 1 1 0 False False False True False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:88965-89903:- gene-YML087C_NCYC1407 rna-NM_001182446.1_NCYC1407 cds-NP_013623.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:94319-95257:- gene-YML087C_PE2H3 rna-NM_001182446.1_PE2H3 cds-NP_013623.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:94257-95195:- gene-YML087C_PE2H4 rna-NM_001182446.1_PE2H4 cds-NP_013623.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:94431-95369:- gene-YML087C_S288C rna-NM_001182446.1_S288C cds-NP_013623.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000041.1:88902-89840:+ gene-YML087C_SA1 rna-NM_001182446.1_SA1 cds-NP_013623.1_SA1 99.3 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:88230-89168:- gene-YML087C_ThermosaccDry rna-NM_001182446.1_ThermosaccDry cds-NP_013623.1_ThermosaccDry 100.0 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:92612-93550:- gene-YML087C_VR1 rna-NM_001182446.1_VR1 cds-NP_013623.1_VR1 99.3 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:67758-68696:- gene-YML087C_ZTW1 rna-NM_001182446.1_ZTW1 cds-NP_013623.1_ZTW1 99.4 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:98957-99895:- gene-YML087C_Sparadoxus rna-NM_001182446.1_Sparadoxus cds-NP_013623.1_Sparadoxus 91.2 100.0 Verified 1 1 1 False True False False False

Additional files