AIM3 (YBR108W)


Gene profile

Gene name: AIM3
Reference locus (S288C): YBR108W
Gene biotype: protein_coding

Description: Altered inheritance of mitochondria protein 3; Protein that inhibits barbed-end actin filament elongation; interacts with Rvs167p; null mutant is viable and displays elevated frequency of mitochondrial genome loss; Belongs to the AIM3 family

Top 10 interactors (score): RVS167 (0.946); RVS161 (0.934); AIM4 (0.864); YSC84 (0.794); LAS17 (0.792); SLA1 (0.786); AIM6 (0.765); AIM2 (0.749); VRP1 (0.729); BZZ1 (0.729); ACF2 (0.712); COF1 (0.705); AIM7 (0.7); MIC12 (0.698); BOL3 (0.697); AIM9 (0.693); AIP1 (0.692); ABP1 (0.689); YBR285W (0.656); ACF4 (0.655)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:437191-440046:+ gene-YBR108W_AKU4011 rna-NM_001178456.2_AKU4011 cds-NP_009666.3_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:428228-431089:+ gene-YBR108W_BG1 rna-NM_001178456.2_BG1 cds-NP_009666.3_BG1 98.4 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:438964-441774:+ gene-YBR108W_Bruggeman rna-NM_001178456.2_Bruggeman cds-NP_009666.3_Bruggeman 98.4 98.8 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005520.1:441735-444566:+ gene-YBR108W_CAT1 rna-NM_001178456.2_CAT1 cds-NP_009666.3_CAT1 99.2 99.5 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:429474-432329:+ gene-YBR108W_CBS1585 rna-NM_001178456.2_CBS1585 cds-NP_009666.3_CBS1585 99.4 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:437594-440422:+ gene-YBR108W_CBS436 rna-NM_001178456.2_CBS436 cds-NP_009666.3_CBS436 97.2 98.8 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:527703-530558:+ gene-YBR108W_CBS6412 rna-NM_001178456.2_CBS6412 cds-NP_009666.3_CBS6412 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:434615-437470:+ gene-YBR108W_CBS6413 rna-NM_001178456.2_CBS6413 cds-NP_009666.3_CBS6413 99.4 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:446720-449563:+ gene-YBR108W_CENPK1137D rna-NM_001178456.2_CENPK1137D cds-NP_009666.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:563980-566817:+ gene-YBR108W_EthanolRed rna-NM_001178456.2_EthanolRed cds-NP_009666.3_EthanolRed 99.6 99.7 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:453263-456100:+ gene-YBR108W_FaliES1 rna-NM_001178456.2_FaliES1 cds-NP_009666.3_FaliES1 99.6 99.7 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000312.1:24175-27018:+ gene-YBR108W_JAY291 rna-NM_001178456.2_JAY291 cds-NP_009666.3_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:440998-444484:+ gene-YBR108W_MUCL30387 rna-NM_001178456.2_MUCL30387 cds-NP_009666.3_MUCL30387 79.4 98.8 Unannotated 1 1 0 False False False True False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:440000-442828:+ gene-YBR108W_MUCL30388 rna-NM_001178456.2_MUCL30388 cds-NP_009666.3_MUCL30388 97.2 98.8 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:427617-430472:+ gene-YBR108W_MUCL39482 rna-NM_001178456.2_MUCL39482 cds-NP_009666.3_MUCL39482 99.4 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:436678-440126:+ gene-YBR108W_MUCL42920 rna-NM_001178456.2_MUCL42920 cds-NP_009666.3_MUCL42920 80.1 98.8 Unannotated 1 1 0 False False False True False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:454619-457462:+ gene-YBR108W_NCIM3186 rna-NM_001178456.2_NCIM3186 cds-NP_009666.3_NCIM3186 99.7 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:430398-433253:+ gene-YBR108W_NCYC1407 rna-NM_001178456.2_NCYC1407 cds-NP_009666.3_NCYC1407 99.4 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:443020-445863:+ gene-YBR108W_PE2H3 rna-NM_001178456.2_PE2H3 cds-NP_009666.3_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:440696-443539:+ gene-YBR108W_PE2H4 rna-NM_001178456.2_PE2H4 cds-NP_009666.3_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:454822-457665:+ gene-YBR108W_S288C rna-NM_001178456.2_S288C cds-NP_009666.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000017.1:20058-22889:- gene-YBR108W_SA1 rna-NM_001178456.2_SA1 cds-NP_009666.3_SA1 99.0 99.5 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:452270-455107:+ gene-YBR108W_ThermosaccDry rna-NM_001178456.2_ThermosaccDry cds-NP_009666.3_ThermosaccDry 99.6 99.7 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:434280-437123:+ gene-YBR108W_VR1 rna-NM_001178456.2_VR1 cds-NP_009666.3_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:427928-430765:+ gene-YBR108W_ZTW1 rna-NM_001178456.2_ZTW1 cds-NP_009666.3_ZTW1 99.6 99.7 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:464863-467733:+ gene-YBR108W_Sparadoxus rna-NM_001178456.2_Sparadoxus cds-NP_009666.3_Sparadoxus 80.6 98.5 Unannotated 1 1 0 False False False False True

Additional files