AIM23 (YJL131C)


Gene profile

Gene name: AIM23
Reference locus (S288C): YJL131C
Gene biotype: protein_coding

Description: Altered inheritance of mitochondria protein 23, mitochondrial; Mitochondrial translation initiation factor 3 (IF3, mIF3); evolutionarily conserved; binds to E. coli ribosomes in vitro; null mutant displays severe respiratory growth defect and elevated frequency of mitochondrial genome loss

Top 10 interactors (score): YGL159W (0.844); VAR1 (0.796); AIM34 (0.75); OLI1 (0.746); ATP6 (0.717); COX2 (0.711); COB (0.705); PET111 (0.691); ATP8 (0.671); GLG2 (0.671); COX1 (0.67); PUF3 (0.669); YGL242C (0.61); YDR132C (0.61); RSM28 (0.595); YDL109C (0.575); YCR101C (0.574); MPO1 (0.574); MRP49 (0.574); AIM24 (0.573)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005304.1:152574-153644:- gene-YJL131C_AKU4011 rna-NM_001181564.1_AKU4011 cds-NP_012404.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000190.1:460074-461144:+ gene-YJL131C_BG1 rna-NM_001181564.1_BG1 cds-NP_012404.1_BG1 99.8 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005512.1:164658-165728:- gene-YJL131C_Bruggeman rna-NM_001181564.1_Bruggeman cds-NP_012404.1_Bruggeman 99.8 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005528.1:168447-169517:- gene-YJL131C_CAT1 rna-NM_001181564.1_CAT1 cds-NP_012404.1_CAT1 99.8 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005368.1:158208-159278:- gene-YJL131C_CBS1585 rna-NM_001181564.1_CBS1585 cds-NP_012404.1_CBS1585 99.8 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005352.1:182957-184027:- gene-YJL131C_CBS436 rna-NM_001181564.1_CBS436 cds-NP_012404.1_CBS436 99.8 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005336.1:154227-155297:- gene-YJL131C_CBS6412 rna-NM_001181564.1_CBS6412 cds-NP_012404.1_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005320.1:155683-156753:- gene-YJL131C_CBS6413 rna-NM_001181564.1_CBS6413 cds-NP_012404.1_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001531.1:146750-147820:- gene-YJL131C_CENPK1137D rna-NM_001181564.1_CENPK1137D cds-NP_012404.1_CENPK1137D 99.6 100.0 Verified 1 1 1 False True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005480.1:156558-157628:- gene-YJL131C_EthanolRed rna-NM_001181564.1_EthanolRed cds-NP_012404.1_EthanolRed 99.8 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005544.1:162209-163279:- gene-YJL131C_FaliES1 rna-NM_001181564.1_FaliES1 cds-NP_012404.1_FaliES1 99.8 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000099.1:43388-44458:- gene-YJL131C_JAY291 rna-NM_001181564.1_JAY291 cds-NP_012404.1_JAY291 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005416.1:166927-167997:- gene-YJL131C_MUCL30387 rna-NM_001181564.1_MUCL30387 cds-NP_012404.1_MUCL30387 99.8 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005448.1:162978-164048:- gene-YJL131C_MUCL30388 rna-NM_001181564.1_MUCL30388 cds-NP_012404.1_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005288.1:157156-158226:- gene-YJL131C_MUCL39482 rna-NM_001181564.1_MUCL39482 cds-NP_012404.1_MUCL39482 99.8 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005432.1:162720-163790:- gene-YJL131C_MUCL42920 rna-NM_001181564.1_MUCL42920 cds-NP_012404.1_MUCL42920 99.8 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011819.1:164257-165327:- gene-YJL131C_NCIM3186 rna-NM_001181564.1_NCIM3186 cds-NP_012404.1_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005272.1:155563-156633:- gene-YJL131C_NCYC1407 rna-NM_001181564.1_NCYC1407 cds-NP_012404.1_NCYC1407 99.8 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994149.1:168366-169436:- gene-YJL131C_PE2H3 rna-NM_001181564.1_PE2H3 cds-NP_012404.1_PE2H3 99.8 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999881.1:168010-169080:- gene-YJL131C_PE2H4 rna-NM_001181564.1_PE2H4 cds-NP_012404.1_PE2H4 99.8 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001142.9:164278-165348:- gene-YJL131C_S288C rna-NM_001181564.1_S288C cds-NP_012404.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000085.1:33821-34891:+ gene-YJL131C_SA1 rna-NM_001181564.1_SA1 cds-NP_012404.1_SA1 99.8 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005496.1:155400-156470:- gene-YJL131C_ThermosaccDry rna-NM_001181564.1_ThermosaccDry cds-NP_012404.1_ThermosaccDry 99.8 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005464.1:162483-163553:- gene-YJL131C_VR1 rna-NM_001181564.1_VR1 cds-NP_012404.1_VR1 99.8 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000021.1:142693-143763:- gene-YJL131C_ZTW1 rna-NM_001181564.1_ZTW1 cds-NP_012404.1_ZTW1 99.8 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047496.1:167912-168982:- gene-YJL131C_Sparadoxus rna-NM_001181564.1_Sparadoxus cds-NP_012404.1_Sparadoxus 88.0 100.0 Verified 1 1 1 False True False False False

Additional files