AIM17 (YHL021C)


Gene profile

Gene name: AIM17
Reference locus (S288C): YHL021C
Gene biotype: protein_coding

Description: Probable oxidoreductase AIM17; Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; null mutant displays reduced frequency of mitochondrial genome loss; Belongs to the gamma-BBH/TMLD family

Top 10 interactors (score): IGD1 (0.95); GAD1 (0.932); GLC3 (0.928); TPS2 (0.924); GOR1 (0.924); TSL1 (0.923); HSP42 (0.922); PGM2 (0.916); PNC1 (0.909); TPS1 (0.908); RGI1 (0.908); STF2 (0.906); RTC3 (0.904); GSY2 (0.901); TFS1 (0.891); HSP104 (0.889); DCS2 (0.883); GLK1 (0.882); GSY1 (0.867); SOL4 (0.866)

Homologues (species, bitscore): TMLHE (Homo sapiens, 72.0); Tmlhe (Mus musculus, 68.2); bbox1 (Danio rerio, 75.1); tmlhe (Xenopus tropicalis, 82.8); CG5321 (Drosophila melanogaster, 90.9); gbh-1 (Caenorhabditis elegans, 101.3)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005302.1:59413-60810:- gene-YHL021C_AKU4011 rna-NM_001179101.1_AKU4011 cds-NP_011842.1_AKU4011 99.4 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000180.1:15978-17375:+ gene-YHL021C_BG1 rna-NM_001179101.1_BG1 cds-NP_011842.1_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005510.1:66055-67452:- gene-YHL021C_Bruggeman rna-NM_001179101.1_Bruggeman cds-NP_011842.1_Bruggeman 99.7 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005526.1:60281-61678:- gene-YHL021C_CAT1 rna-NM_001179101.1_CAT1 cds-NP_011842.1_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005366.1:60008-61405:- gene-YHL021C_CBS1585 rna-NM_001179101.1_CBS1585 cds-NP_011842.1_CBS1585 99.6 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005350.1:52535-53932:- gene-YHL021C_CBS436 rna-NM_001179101.1_CBS436 cds-NP_011842.1_CBS436 99.4 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005334.1:59958-61355:- gene-YHL021C_CBS6412 rna-NM_001179101.1_CBS6412 cds-NP_011842.1_CBS6412 99.6 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005318.1:59423-60820:- gene-YHL021C_CBS6413 rna-NM_001179101.1_CBS6413 cds-NP_011842.1_CBS6413 99.6 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001529.1:57623-59020:- gene-YHL021C_CENPK1137D rna-NM_001179101.1_CENPK1137D cds-NP_011842.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005478.1:59636-61033:- gene-YHL021C_EthanolRed rna-NM_001179101.1_EthanolRed cds-NP_011842.1_EthanolRed 99.7 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005542.1:59952-61349:- gene-YHL021C_FaliES1 rna-NM_001179101.1_FaliES1 cds-NP_011842.1_FaliES1 99.7 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000003.1:28641-30038:- gene-YHL021C_JAY291 rna-NM_001179101.1_JAY291 cds-NP_011842.1_JAY291 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005414.1:63044-64441:- gene-YHL021C_MUCL30387 rna-NM_001179101.1_MUCL30387 cds-NP_011842.1_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005446.1:63740-65137:- gene-YHL021C_MUCL30388 rna-NM_001179101.1_MUCL30388 cds-NP_011842.1_MUCL30388 99.6 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005286.1:58999-60396:- gene-YHL021C_MUCL39482 rna-NM_001179101.1_MUCL39482 cds-NP_011842.1_MUCL39482 99.5 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005430.1:62971-64368:- gene-YHL021C_MUCL42920 rna-NM_001179101.1_MUCL42920 cds-NP_011842.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011817.1:64344-65741:- gene-YHL021C_NCIM3186 rna-NM_001179101.1_NCIM3186 cds-NP_011842.1_NCIM3186 99.4 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005270.1:58490-59887:- gene-YHL021C_NCYC1407 rna-NM_001179101.1_NCYC1407 cds-NP_011842.1_NCYC1407 99.5 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994147.1:54715-56112:- gene-YHL021C_PE2H3 rna-NM_001179101.1_PE2H3 cds-NP_011842.1_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999879.1:62156-63553:- gene-YHL021C_PE2H4 rna-NM_001179101.1_PE2H4 cds-NP_011842.1_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001140.6:64462-65859:- gene-YHL021C_S288C rna-NM_001179101.1_S288C cds-NP_011842.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:48819-50216:- gene-YHL021C_SA1 rna-NM_001179101.1_SA1 cds-NP_011842.1_SA1 99.5 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005494.1:61047-62444:- gene-YHL021C_ThermosaccDry rna-NM_001179101.1_ThermosaccDry cds-NP_011842.1_ThermosaccDry 99.7 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005462.1:65758-67155:- gene-YHL021C_VR1 rna-NM_001179101.1_VR1 cds-NP_011842.1_VR1 99.5 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000017.1:52246-53643:- gene-YHL021C_ZTW1 rna-NM_001179101.1_ZTW1 cds-NP_011842.1_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047494.1:58542-59939:- gene-YHL021C_Sparadoxus rna-NM_001179101.1_Sparadoxus cds-NP_011842.1_Sparadoxus 90.9 100.0 Verified 1 1 1 False True False False False

Additional files