AI5_ALPHA (Q0070)

Gene profile

Gene name: AI5_ALPHA
Reference locus (S288C): Q0070
Gene biotype: protein_coding

Description: Intron-encoded DNA endonuclease aI5 alpha; Endonuclease I-SceIV; involved in intron mobility; encoded by a mobile group I intron within the mitochondrial COX1 gene; In the N-terminal section; belongs to the heme-copper respiratory oxidase family

Top 10 interactors (score): COX2 (0.997); COX3 (0.993); ATP6 (0.991); BI3 (0.97); BI4 (0.958); AI5_BETA (0.952); COX1 (0.951); AI4 (0.943); COB (0.935); COX6 (0.921); COX12 (0.869); RIP1 (0.868); QCR2 (0.82); COX10 (0.809); BI2 (0.78); COX4 (0.78); MAS1 (0.76); SLM3 (0.755); PET54 (0.75); CYT1 (0.745)

Homologues (species, bitscore): MT-CO1 (Homo sapiens, 447.2); mt-Co1 (Mus musculus, 454.1); COX1 (Danio rerio, 447.6); COX1 (Xenopus tropicalis, 448.4); mt:CoI (Drosophila melanogaster, 455.7); COX1 (Caenorhabditis elegans, 407.5); COX1 (Arabidopsis thaliana, 486.9)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000055.1:13277-16691:+ gene-Q0070_AKU4011 rna-Q0070_AKU4011 cds-NP_009306.1_AKU4011 97.3 97.9 Unannotated 1 1 0 Unknown False False False False
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000033.1:14328-19684:+ gene-Q0070_Bruggeman rna-Q0070_Bruggeman cds-NP_009306.1_Bruggeman 98.9 99.8 Unannotated 1 1 0 Unknown False False False False
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000376.1:7819-15002:+ gene-Q0070_CAT1 rna-Q0070_CAT1 cds-NP_009306.1_CAT1 37.2 37.4 Unannotated 1 1 0 Unknown False False False False
CBS1585 GCA_001738375.1 Sake Asia MBVS01000067.1:11521-14934:+ gene-Q0070_CBS1585 rna-Q0070_CBS1585 cds-NP_009306.1_CBS1585 97.1 97.9 Unannotated 1 1 0 Unknown False False False False
CBS436 GCA_001738355.1 Sake Asia MBVR01000053.1:13613-21432:+ gene-Q0070_CBS436 rna-Q0070_CBS436 cds-NP_009306.1_CBS436 96.1 99.2 Unannotated 1 1 0 Unknown False False False False
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000062.1:7219-10769:+ gene-Q0070_CBS6412 rna-Q0070_CBS6412 cds-NP_009306.1_CBS6412 97.1 97.9 Unannotated 1 1 0 Unknown False False False False
CBS6413 GCA_001738265.1 Sake Asia MBVP01000101.1:38864-46748:+ gene-Q0070_CBS6413 rna-Q0070_CBS6413 cds-NP_009306.1_CBS6413 98.8 99.8 Unannotated 1 1 0 Unknown False False False False
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000074.1:7651-12497:+ gene-Q0070_EthanolRed rna-Q0070_EthanolRed cds-NP_009306.1_EthanolRed 37.6 38.0 Unannotated 1 1 0 Unknown False False False False
FaliES1 GCA_001738715.1 Bioethanol Asia MBWD01000016.1:13890-18736:+ gene-Q0070_FaliES1 rna-Q0070_FaliES1 cds-NP_009306.1_FaliES1 37.6 38.0 Unannotated 1 1 0 Unknown False False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000029.1:277-7141:- gene-Q0070_JAY291 rna-Q0070_JAY291 cds-NP_009306.1_JAY291 71.7 88.9 Unannotated 1 1 0 Unknown False False False False
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000168.1:11838-17188:+ gene-Q0070_MUCL30387 rna-Q0070_MUCL30387 cds-NP_009306.1_MUCL30387 99.2 99.8 Unannotated 1 1 0 Unknown False False False False
MUCL30388 GCA_001738495.1 Bread Europe MBVW01000208.1:13918-19268:+ gene-Q0070_MUCL30388 rna-Q0070_MUCL30388 cds-NP_009306.1_MUCL30388 99.2 99.8 Unannotated 1 1 0 Unknown False False False False
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000090.1:5742-9155:+ gene-Q0070_MUCL39482 rna-Q0070_MUCL39482 cds-NP_009306.1_MUCL39482 97.1 97.9 Unannotated 1 1 0 Unknown False False False False
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000309.1:12713-18069:+ gene-Q0070_MUCL42920 rna-Q0070_MUCL42920 cds-NP_009306.1_MUCL42920 98.9 99.8 Unannotated 1 1 0 Unknown False False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011826.1:13818-23167:+ gene-Q0070_NCIM3186 rna-Q0070_NCIM3186 cds-NP_009306.1_NCIM3186 52.6 100.0 Unannotated 1 1 0 Unknown False False False False
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000021.1:12259-20143:+ gene-Q0070_NCYC1407 rna-Q0070_NCYC1407 cds-NP_009306.1_NCYC1407 98.8 99.8 Unannotated 1 1 0 Unknown False False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994156.1:11349-18213:+ gene-Q0070_PE2H3 rna-Q0070_PE2H3 cds-NP_009306.1_PE2H3 71.7 88.9 Unannotated 1 1 0 Unknown False False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999888.1:11349-18213:+ gene-Q0070_PE2H4 rna-Q0070_PE2H4 cds-NP_009306.1_PE2H4 71.7 88.9 Unannotated 1 1 0 Unknown False False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001224.1:13818-23167:+ gene-Q0070_S288C rna-Q0070_S288C cds-NP_009306.1_S288C 100.0 100.0 Unannotated 1 1 0 Unknown False False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000049.1:5802-17076:- gene-Q0070_SA1 rna-Q0070_SA1 cds-NP_009306.1_SA1 73.0 90.4 Unannotated 1 1 0 Unknown False False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000010.1:11760-16606:+ gene-Q0070_ThermosaccDry rna-Q0070_ThermosaccDry cds-NP_009306.1_ThermosaccDry 37.6 38.0 Unannotated 1 1 0 Unknown False False False False
VR1 GCA_001738595.1 Bioethanol South America MBVZ01000293.1:13182-20046:+ gene-Q0070_VR1 rna-Q0070_VR1 cds-NP_009306.1_VR1 71.7 88.9 Unannotated 1 1 0 Unknown False False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_018044.1:23410-27345:+ gene-Q0070_Sparadoxus rna-Q0070_Sparadoxus cds-NP_009306.1_Sparadoxus 30.6 31.3 Unannotated 1 1 0 Unknown False False False False

Additional files