AHC2 (YCR082W)


Gene profile

Gene name: AHC2
Reference locus (S288C): YCR082W
Gene biotype: protein_coding

Description: Component of the ADA histone acetyltransferase complex; Ahc2p and Ahc1p are unique to the ADA complex and not shared with the related SAGA and SLIK complexes; may tether Ahc1p to the complex

Top 10 interactors (score): AHC1 (0.99); GCN5 (0.937); NGG1 (0.936); SGF29 (0.924); SRB8 (0.918); ADA2 (0.888); TRA1 (0.871); HFI1 (0.854); OAF3 (0.779); URC2 (0.749); YAF9 (0.72); EAF3 (0.72); ACT1 (0.72); EAF7 (0.72); EAF1 (0.72); ESA1 (0.72); EAF6 (0.72); EAF5 (0.72); EPL1 (0.72); ARP4 (0.72)

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005297.1:253384-253770:+ gene-YCR082W_AKU4011 rna-NM_001178788.1_AKU4011 cds-NP_010005.1_AKU4011 99.4 100.0 Verified 1 1 1 True True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000067.1:112039-112425:+ gene-YCR082W_BG1 rna-NM_001178788.1_BG1 cds-NP_010005.1_BG1 99.7 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005505.1:249594-249980:+ gene-YCR082W_Bruggeman rna-NM_001178788.1_Bruggeman cds-NP_010005.1_Bruggeman 99.7 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005521.1:260644-261030:+ gene-YCR082W_CAT1 rna-NM_001178788.1_CAT1 cds-NP_010005.1_CAT1 99.7 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005361.1:248199-248585:+ gene-YCR082W_CBS1585 rna-NM_001178788.1_CBS1585 cds-NP_010005.1_CBS1585 99.4 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005345.1:259979-260365:+ gene-YCR082W_CBS436 rna-NM_001178788.1_CBS436 cds-NP_010005.1_CBS436 99.7 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005329.1:239901-240287:+ gene-YCR082W_CBS6412 rna-NM_001178788.1_CBS6412 cds-NP_010005.1_CBS6412 99.4 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005313.1:254249-254635:+ gene-YCR082W_CBS6413 rna-NM_001178788.1_CBS6413 cds-NP_010005.1_CBS6413 99.4 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001524.1:258080-258466:+ gene-YCR082W_CENPK1137D rna-NM_001178788.1_CENPK1137D cds-NP_010005.1_CENPK1137D 99.7 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005473.1:249199-249585:+ gene-YCR082W_EthanolRed rna-NM_001178788.1_EthanolRed cds-NP_010005.1_EthanolRed 99.4 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005537.1:254562-254948:+ gene-YCR082W_FaliES1 rna-NM_001178788.1_FaliES1 cds-NP_010005.1_FaliES1 99.4 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000323.1:33843-34229:- gene-YCR082W_JAY291 rna-NM_001178788.1_JAY291 cds-NP_010005.1_JAY291 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005409.1:246722-247108:+ gene-YCR082W_MUCL30387 rna-NM_001178788.1_MUCL30387 cds-NP_010005.1_MUCL30387 99.7 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005441.1:246589-246975:+ gene-YCR082W_MUCL30388 rna-NM_001178788.1_MUCL30388 cds-NP_010005.1_MUCL30388 99.7 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005281.1:254763-255149:+ gene-YCR082W_MUCL39482 rna-NM_001178788.1_MUCL39482 cds-NP_010005.1_MUCL39482 99.4 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005425.1:251168-251554:+ gene-YCR082W_MUCL42920 rna-NM_001178788.1_MUCL42920 cds-NP_010005.1_MUCL42920 99.7 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011812.1:258515-258901:+ gene-YCR082W_NCIM3186 rna-NM_001178788.1_NCIM3186 cds-NP_010005.1_NCIM3186 99.7 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005265.1:255602-255988:+ gene-YCR082W_NCYC1407 rna-NM_001178788.1_NCYC1407 cds-NP_010005.1_NCYC1407 99.4 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994142.1:270156-270542:+ gene-YCR082W_PE2H3 rna-NM_001178788.1_PE2H3 cds-NP_010005.1_PE2H3 99.7 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999874.1:258710-259096:+ gene-YCR082W_PE2H4 rna-NM_001178788.1_PE2H4 cds-NP_010005.1_PE2H4 99.4 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001135.5:258883-259269:+ gene-YCR082W_S288C rna-NM_001178788.1_S288C cds-NP_010005.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000044.1:58731-59117:+ gene-YCR082W_SA1 rna-NM_001178788.1_SA1 cds-NP_010005.1_SA1 99.7 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005489.1:254489-254875:+ gene-YCR082W_ThermosaccDry rna-NM_001178788.1_ThermosaccDry cds-NP_010005.1_ThermosaccDry 99.4 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005457.1:265698-266084:+ gene-YCR082W_VR1 rna-NM_001178788.1_VR1 cds-NP_010005.1_VR1 99.7 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000004.1:252344-252730:+ gene-YCR082W_ZTW1 rna-NM_001178788.1_ZTW1 cds-NP_010005.1_ZTW1 99.4 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047489.1:286491-286877:+ gene-YCR082W_Sparadoxus rna-NM_001178788.1_Sparadoxus cds-NP_010005.1_Sparadoxus 91.2 100.0 Verified 1 1 1 False True False False False

Additional files