Gene name: AGX1
Reference locus (S288C): YFL030W
Gene biotype: protein_coding
Description: Alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase; Alanine--glyoxylate aminotransferase 1; Alanine:glyoxylate aminotransferase (AGT); catalyzes the synthesis of glycine from glyoxylate, which is one of three pathways for glycine biosynthesis in yeast; similar to mammalian and plant alanine:glyoxylate aminotransferases; human homolog AGXT complements yeast null mutant; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family
Top 10 interactors (score): GLY1 (0.998); SHM2 (0.996); GOR1 (0.993); CYB2 (0.988); GCV1 (0.984); ICL1 (0.982); MLS1 (0.982); SER2 (0.977); ALT1 (0.977); GCV3 (0.975); ACO1 (0.973); GCV2 (0.973); FUM1 (0.973); YFR006W (0.971); ALT2 (0.967); TPI1 (0.966); DAL7 (0.964); SHM1 (0.959); AAT1 (0.958); LPD1 (0.953)
Homologues (species, bitscore): AGXT (Homo sapiens, 91.7); Agxt (Mus musculus, 84.7); agxta (Danio rerio, 95.5); agxt (Xenopus tropicalis, 89.4); Spat (Drosophila melanogaster, 100.9); T14D7.1 (Caenorhabditis elegans, 114.4); AGT (Arabidopsis thaliana, 124.4)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:73185-74342:+ | gene-YFL030W_AKU4011 | rna-NM_001179936.1_AKU4011 | cds-NP_116623.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000089.1:3513-4670:+ | gene-YFL030W_BG1 | rna-NM_001179936.1_BG1 | cds-NP_116623.1_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:72053-73210:+ | gene-YFL030W_Bruggeman | rna-NM_001179936.1_Bruggeman | cds-NP_116623.1_Bruggeman | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:77202-78359:+ | gene-YFL030W_CAT1 | rna-NM_001179936.1_CAT1 | cds-NP_116623.1_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:73993-75150:+ | gene-YFL030W_CBS1585 | rna-NM_001179936.1_CBS1585 | cds-NP_116623.1_CBS1585 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:47501-48658:+ | gene-YFL030W_CBS436 | rna-NM_001179936.1_CBS436 | cds-NP_116623.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:73727-74884:+ | gene-YFL030W_CBS6412 | rna-NM_001179936.1_CBS6412 | cds-NP_116623.1_CBS6412 | 99.5 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:76262-77419:+ | gene-YFL030W_CBS6413 | rna-NM_001179936.1_CBS6413 | cds-NP_116623.1_CBS6413 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:73157-74314:+ | gene-YFL030W_CENPK1137D | rna-NM_001179936.1_CENPK1137D | cds-NP_116623.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:72146-73303:+ | gene-YFL030W_EthanolRed | rna-NM_001179936.1_EthanolRed | cds-NP_116623.1_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:73785-74942:+ | gene-YFL030W_FaliES1 | rna-NM_001179936.1_FaliES1 | cds-NP_116623.1_FaliES1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:82182-83339:+ | gene-YFL030W_JAY291 | rna-NM_001179936.1_JAY291 | cds-NP_116623.1_JAY291 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:74156-75313:+ | gene-YFL030W_MUCL30387 | rna-NM_001179936.1_MUCL30387 | cds-NP_116623.1_MUCL30387 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:72087-73244:+ | gene-YFL030W_MUCL30388 | rna-NM_001179936.1_MUCL30388 | cds-NP_116623.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:72378-73535:+ | gene-YFL030W_MUCL39482 | rna-NM_001179936.1_MUCL39482 | cds-NP_116623.1_MUCL39482 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:70490-71647:+ | gene-YFL030W_MUCL42920 | rna-NM_001179936.1_MUCL42920 | cds-NP_116623.1_MUCL42920 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:76830-77987:+ | gene-YFL030W_NCIM3186 | rna-NM_001179936.1_NCIM3186 | cds-NP_116623.1_NCIM3186 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:73467-74624:+ | gene-YFL030W_NCYC1407 | rna-NM_001179936.1_NCYC1407 | cds-NP_116623.1_NCYC1407 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:93362-94519:+ | gene-YFL030W_PE2H3 | rna-NM_001179936.1_PE2H3 | cds-NP_116623.1_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:92913-94070:+ | gene-YFL030W_PE2H4 | rna-NM_001179936.1_PE2H4 | cds-NP_116623.1_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:76831-77988:+ | gene-YFL030W_S288C | rna-NM_001179936.1_S288C | cds-NP_116623.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000117.1:901-2058:+ | gene-YFL030W_SA1 | rna-NM_001179936.1_SA1 | cds-NP_116623.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:72968-74125:+ | gene-YFL030W_ThermosaccDry | rna-NM_001179936.1_ThermosaccDry | cds-NP_116623.1_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:81510-82667:+ | gene-YFL030W_VR1 | rna-NM_001179936.1_VR1 | cds-NP_116623.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000013.1:3446-4603:+ | gene-YFL030W_ZTW1 | rna-NM_001179936.1_ZTW1 | cds-NP_116623.1_ZTW1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:97224-98381:+ | gene-YFL030W_Sparadoxus | rna-NM_001179936.1_Sparadoxus | cds-NP_116623.1_Sparadoxus | 90.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |