Gene name: AGP3
Reference locus (S288C): YFL055W
Gene biotype: protein_coding
Description: Low-affinity amino acid permease; may act to supply the cell with amino acids as nitrogen source in nitrogen-poor conditions; transcription is induced under conditions of sulfur limitation; plays a role in regulating Ty1 transposition
Top 10 interactors (score): AQY3 (0.915); YOL163W (0.744); YOL162W (0.738); JLP1 (0.737); BDS1 (0.716); YBR287W (0.712); GRX8 (0.712); MRPL19 (0.691); ARO1 (0.656); SEO1 (0.652); YCT1 (0.652); PDC6 (0.651); YIL166C (0.604); DAK2 (0.592); CPA2 (0.59); ARO7 (0.58); YLL053C (0.574); YLR462W (0.572); MUP1 (0.572); SUL2 (0.571)
Homologues (species, bitscore): SLC7A2 (Homo sapiens, 58.5); Slc7a2 (Mus musculus, 57.0); slc7a1 (Danio rerio, 56.2); slc7a1 (Xenopus tropicalis, 58.2); CG5535 (Drosophila melanogaster, 53.5); At5g36940 (Arabidopsis thaliana, 60.1)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:13333-15009:+ | gene-YFL055W_AKU4011 | rna-NM_001179912.1_AKU4011 | cds-NP_116600.1_AKU4011 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000085.1:4334-6010:+ | gene-YFL055W_BG1 | rna-NM_001179912.1_BG1 | cds-NP_116600.1_BG1 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:14024-15700:+ | gene-YFL055W_CBS1585 | rna-NM_001179912.1_CBS1585 | cds-NP_116600.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:28828-30504:+ | gene-YFL055W_CBS436 | rna-NM_001179912.1_CBS436 | cds-NP_116600.1_CBS436 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:14263-15939:+ | gene-YFL055W_CBS6412 | rna-NM_001179912.1_CBS6412 | cds-NP_116600.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:16425-18101:+ | gene-YFL055W_CBS6413 | rna-NM_001179912.1_CBS6413 | cds-NP_116600.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:13330-15006:+ | gene-YFL055W_CENPK1137D | rna-NM_001179912.1_CENPK1137D | cds-NP_116600.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:12691-14367:+ | gene-YFL055W_EthanolRed | rna-NM_001179912.1_EthanolRed | cds-NP_116600.1_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:13898-15574:+ | gene-YFL055W_FaliES1 | rna-NM_001179912.1_FaliES1 | cds-NP_116600.1_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:3218-4895:+ | gene-YFL055W_JAY291 | rna-NM_001179912.1_JAY291 | cds-NP_116600.1_JAY291 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:12540-14216:+ | gene-YFL055W_MUCL39482 | rna-NM_001179912.1_MUCL39482 | cds-NP_116600.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:13616-15292:+ | gene-YFL055W_NCYC1407 | rna-NM_001179912.1_NCYC1407 | cds-NP_116600.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:14097-15773:+ | gene-YFL055W_PE2H3 | rna-NM_001179912.1_PE2H3 | cds-NP_116600.1_PE2H3 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:13649-15326:+ | gene-YFL055W_PE2H4 | rna-NM_001179912.1_PE2H4 | cds-NP_116600.1_PE2H4 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:17004-18680:+ | gene-YFL055W_S288C | rna-NM_001179912.1_S288C | cds-NP_116600.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000022.1:142196-143872:- | gene-YFL055W_SA1 | rna-NM_001179912.1_SA1 | cds-NP_116600.1_SA1 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:13087-14763:+ | gene-YFL055W_ThermosaccDry | rna-NM_001179912.1_ThermosaccDry | cds-NP_116600.1_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:18679-20355:+ | gene-YFL055W_VR1 | rna-NM_001179912.1_VR1 | cds-NP_116600.1_VR1 | 98.8 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:15870-17546:+ | gene-YFL055W_Sparadoxus | rna-NM_001179912.1_Sparadoxus | cds-NP_116600.1_Sparadoxus | 89.5 | 99.9 | Verified | 1 | 1 | 1 | False | True | False | False | False |