AGP2 (YBR132C)


Gene profile

Gene name: AGP2
Reference locus (S288C): YBR132C
Gene biotype: protein_coding

Description: General amino acid permease AGP2; Plasma membrane regulator of polyamine and carnitine transport; has similarity to transporters but lacks transport activity; may act as a sensor that transduces environmental signals; has a positive or negative regulatory effect on transcription of many transporter genes

Top 10 interactors (score): DUR3 (0.764); CRC1 (0.722); CAT2 (0.717); YAT2 (0.716); HNM1 (0.695); VPS70 (0.555); YAT1 (0.55); SGA1 (0.53); YBR139W (0.528); SVF1 (0.528); TRK2 (0.505); AVT5 (0.495); TPO2 (0.494); STP1 (0.485); TPO5 (0.481); OXR1 (0.48); BRP1 (0.454); SKY1 (0.454); ACH1 (0.436); ACS1 (0.424)

Homologues (species, bitscore): Slc7a12 (Mus musculus, 52.0)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005296.1:482543-484333:- gene-YBR132C_AKU4011 rna-NM_001178480.1_AKU4011 cds-NP_009690.1_AKU4011 99.2 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000179.1:473106-474896:- gene-YBR132C_BG1 rna-NM_001178480.1_BG1 cds-NP_009690.1_BG1 99.2 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005504.1:484346-486136:- gene-YBR132C_Bruggeman rna-NM_001178480.1_Bruggeman cds-NP_009690.1_Bruggeman 99.3 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005534.1:379683-381473:- gene-YBR132C_CAT1 rna-NM_001178480.1_CAT1 cds-NP_009690.1_CAT1 99.3 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005360.1:474324-476113:- gene-YBR132C_CBS1585 rna-NM_001178480.1_CBS1585 cds-NP_009690.1_CBS1585 99.2 99.9 Unannotated 1 1 0 False False False True False
CBS436 GCA_001738355.1 Sake Asia CM005344.1:482427-484217:- gene-YBR132C_CBS436 rna-NM_001178480.1_CBS436 cds-NP_009690.1_CBS436 99.3 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005328.1:572189-573979:- gene-YBR132C_CBS6412 rna-NM_001178480.1_CBS6412 cds-NP_009690.1_CBS6412 99.2 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005312.1:479954-481744:- gene-YBR132C_CBS6413 rna-NM_001178480.1_CBS6413 cds-NP_009690.1_CBS6413 99.2 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001523.1:493415-495213:- gene-YBR132C_CENPK1137D rna-NM_001178480.1_CENPK1137D cds-NP_009690.1_CENPK1137D 96.7 100.0 Unannotated 1 1 0 False False False True False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005472.1:608562-610352:- gene-YBR132C_EthanolRed rna-NM_001178480.1_EthanolRed cds-NP_009690.1_EthanolRed 99.3 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005536.1:498574-500364:- gene-YBR132C_FaliES1 rna-NM_001178480.1_FaliES1 cds-NP_009690.1_FaliES1 99.3 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000444.1:22028-23818:- gene-YBR132C_JAY291 rna-NM_001178480.1_JAY291 cds-NP_009690.1_JAY291 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005408.1:487219-489009:- gene-YBR132C_MUCL30387 rna-NM_001178480.1_MUCL30387 cds-NP_009690.1_MUCL30387 99.3 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005440.1:486507-488297:- gene-YBR132C_MUCL30388 rna-NM_001178480.1_MUCL30388 cds-NP_009690.1_MUCL30388 99.5 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005280.1:472711-474500:- gene-YBR132C_MUCL39482 rna-NM_001178480.1_MUCL39482 cds-NP_009690.1_MUCL39482 99.2 99.9 Unannotated 1 1 0 False False False True False
MUCL42920 GCA_001738485.1 Bread Europe CM005424.1:482612-484402:- gene-YBR132C_MUCL42920 rna-NM_001178480.1_MUCL42920 cds-NP_009690.1_MUCL42920 99.6 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011811.1:499449-501239:- gene-YBR132C_NCIM3186 rna-NM_001178480.1_NCIM3186 cds-NP_009690.1_NCIM3186 99.3 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005264.1:475249-477039:- gene-YBR132C_NCYC1407 rna-NM_001178480.1_NCYC1407 cds-NP_009690.1_NCYC1407 99.2 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994141.1:487873-489663:- gene-YBR132C_PE2H3 rna-NM_001178480.1_PE2H3 cds-NP_009690.1_PE2H3 99.3 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999873.1:485549-487339:- gene-YBR132C_PE2H4 rna-NM_001178480.1_PE2H4 cds-NP_009690.1_PE2H4 99.3 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001134.8:499652-501442:- gene-YBR132C_S288C rna-NM_001178480.1_S288C cds-NP_009690.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000032.1:20831-22621:- gene-YBR132C_SA1 rna-NM_001178480.1_SA1 cds-NP_009690.1_SA1 99.2 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005488.1:497587-499377:- gene-YBR132C_ThermosaccDry rna-NM_001178480.1_ThermosaccDry cds-NP_009690.1_ThermosaccDry 99.3 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005456.1:479080-480870:- gene-YBR132C_VR1 rna-NM_001178480.1_VR1 cds-NP_009690.1_VR1 99.2 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000003.1:472735-474525:- gene-YBR132C_ZTW1 rna-NM_001178480.1_ZTW1 cds-NP_009690.1_ZTW1 99.3 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047488.1:509978-511768:- gene-YBR132C_Sparadoxus rna-NM_001178480.1_Sparadoxus cds-NP_009690.1_Sparadoxus 91.9 100.0 Verified 1 1 1 False True False False False

Additional files