Gene name: AGP1
Reference locus (S288C): YCL025C
Gene biotype: protein_coding
Description: Low-affinity amino acid permease with broad substrate range; involved in uptake of asparagine, glutamine, and other amino acids; expression regulated by SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p); AGP1 has a paralog, GNP1, that arose from the whole genome duplication; Belongs to the amino acid-polyamine-organocation (APC) superfamily. YAT (TC 2.A.3.10) family
Top 10 interactors (score): GNP1 (0.999); TAT1 (0.923); GAP1 (0.793); PTR2 (0.78); PTR3 (0.78); SSY5 (0.779); MEP2 (0.754); STP1 (0.747); STP2 (0.705); RNH201 (0.693); MEP1 (0.679); AVT5 (0.643); SHR3 (0.641); MEP3 (0.631); DAL81 (0.582); ASI1 (0.573); MUP1 (0.565); GLT1 (0.526); POL2 (0.52); DAL5 (0.52)
Homologues (species, bitscore): SLC7A14 (Homo sapiens, 63.2); Slc7a8 (Mus musculus, 64.7); slc7a8a (Danio rerio, 62.0); slc7a5 (Xenopus tropicalis, 67.0); aat-1 (Caenorhabditis elegans, 59.3); At5g36940 (Arabidopsis thaliana, 64.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:77379-79280:- | gene-YCL025C_AKU4011 | rna-NM_001178671.1_AKU4011 | cds-NP_009905.3_AKU4011 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000178.1:67830-69731:+ | gene-YCL025C_BG1 | rna-NM_001178671.1_BG1 | cds-NP_009905.3_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:65569-67470:- | gene-YCL025C_Bruggeman | rna-NM_001178671.1_Bruggeman | cds-NP_009905.3_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:77183-79084:- | gene-YCL025C_CAT1 | rna-NM_001178671.1_CAT1 | cds-NP_009905.3_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:78027-79928:- | gene-YCL025C_CBS1585 | rna-NM_001178671.1_CBS1585 | cds-NP_009905.3_CBS1585 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:76510-78411:- | gene-YCL025C_CBS436 | rna-NM_001178671.1_CBS436 | cds-NP_009905.3_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:65477-67378:- | gene-YCL025C_CBS6412 | rna-NM_001178671.1_CBS6412 | cds-NP_009905.3_CBS6412 | 99.3 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:76844-78745:- | gene-YCL025C_CBS6413 | rna-NM_001178671.1_CBS6413 | cds-NP_009905.3_CBS6413 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:75615-77516:- | gene-YCL025C_CENPK1137D | rna-NM_001178671.1_CENPK1137D | cds-NP_009905.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:75397-77298:- | gene-YCL025C_EthanolRed | rna-NM_001178671.1_EthanolRed | cds-NP_009905.3_EthanolRed | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:76357-78258:- | gene-YCL025C_FaliES1 | rna-NM_001178671.1_FaliES1 | cds-NP_009905.3_FaliES1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:6165-8066:+ | gene-YCL025C_JAY291 | rna-NM_001178671.1_JAY291 | cds-NP_009905.3_JAY291 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:63750-65651:- | gene-YCL025C_MUCL30387 | rna-NM_001178671.1_MUCL30387 | cds-NP_009905.3_MUCL30387 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:64034-65935:- | gene-YCL025C_MUCL30388 | rna-NM_001178671.1_MUCL30388 | cds-NP_009905.3_MUCL30388 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:78443-80344:- | gene-YCL025C_MUCL39482 | rna-NM_001178671.1_MUCL39482 | cds-NP_009905.3_MUCL39482 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:64556-66457:- | gene-YCL025C_MUCL42920 | rna-NM_001178671.1_MUCL42920 | cds-NP_009905.3_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:75650-77551:- | gene-YCL025C_NCIM3186 | rna-NM_001178671.1_NCIM3186 | cds-NP_009905.3_NCIM3186 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:78927-80828:- | gene-YCL025C_NCYC1407 | rna-NM_001178671.1_NCYC1407 | cds-NP_009905.3_NCYC1407 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:76445-78346:- | gene-YCL025C_PE2H3 | rna-NM_001178671.1_PE2H3 | cds-NP_009905.3_PE2H3 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:76402-78303:- | gene-YCL025C_PE2H4 | rna-NM_001178671.1_PE2H4 | cds-NP_009905.3_PE2H4 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:76018-77919:- | gene-YCL025C_S288C | rna-NM_001178671.1_S288C | cds-NP_009905.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:63148-65049:- | gene-YCL025C_SA1 | rna-NM_001178671.1_SA1 | cds-NP_009905.3_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:76658-78559:- | gene-YCL025C_ThermosaccDry | rna-NM_001178671.1_ThermosaccDry | cds-NP_009905.3_ThermosaccDry | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:82933-84834:- | gene-YCL025C_VR1 | rna-NM_001178671.1_VR1 | cds-NP_009905.3_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:76853-78754:- | gene-YCL025C_ZTW1 | rna-NM_001178671.1_ZTW1 | cds-NP_009905.3_ZTW1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:106374-108275:- | gene-YCL025C_Sparadoxus | rna-NM_001178671.1_Sparadoxus | cds-NP_009905.3_Sparadoxus | 92.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |