Gene name: AGE2
Reference locus (S288C): YIL044C
Gene biotype: protein_coding
Description: ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector; involved in Trans-Golgi-Network (TGN) transport; contains C2C2H2 cysteine/histidine motif
Top 10 interactors (score): ARF1 (0.957); SEC7 (0.91); GEA2 (0.91); SWH1 (0.883); GCS1 (0.881); ARL1 (0.861); SYT1 (0.834); CSR1 (0.812); APL2 (0.808); ARF3 (0.782); INP53 (0.776); SEC14 (0.756); GEA1 (0.725); ARF2 (0.724); SEC26 (0.72); YPT31 (0.72); CAP1 (0.679); LRG1 (0.65); VID27 (0.646); COP1 (0.643)
Homologues (species, bitscore): SMAP2 (Homo sapiens, 129.8); Smap1 (Mus musculus, 125.9); smap1 (Danio rerio, 130.6); smap1 (Xenopus tropicalis, 133.7); CG8243 (Drosophila melanogaster, 137.9); W09D10.1 (Caenorhabditis elegans, 122.1); AGD5 (Arabidopsis thaliana, 126.7)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005303.1:269781-270677:- | gene-YIL044C_AKU4011 | rna-NM_001179394.3_AKU4011 | cds-NP_012220.3_AKU4011 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000164.1:131207-132103:- | gene-YIL044C_BG1 | rna-NM_001179394.3_BG1 | cds-NP_012220.3_BG1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005511.1:276039-276935:- | gene-YIL044C_Bruggeman | rna-NM_001179394.3_Bruggeman | cds-NP_012220.3_Bruggeman | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005527.1:263941-264837:- | gene-YIL044C_CAT1 | rna-NM_001179394.3_CAT1 | cds-NP_012220.3_CAT1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005367.1:269606-270502:- | gene-YIL044C_CBS1585 | rna-NM_001179394.3_CBS1585 | cds-NP_012220.3_CBS1585 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005351.1:264915-265811:- | gene-YIL044C_CBS436 | rna-NM_001179394.3_CBS436 | cds-NP_012220.3_CBS436 | 98.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005335.1:266221-267117:- | gene-YIL044C_CBS6412 | rna-NM_001179394.3_CBS6412 | cds-NP_012220.3_CBS6412 | 99.4 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005319.1:261772-262668:- | gene-YIL044C_CBS6413 | rna-NM_001179394.3_CBS6413 | cds-NP_012220.3_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001530.1:264659-265555:- | gene-YIL044C_CENPK1137D | rna-NM_001179394.3_CENPK1137D | cds-NP_012220.3_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005479.1:253695-254591:- | gene-YIL044C_EthanolRed | rna-NM_001179394.3_EthanolRed | cds-NP_012220.3_EthanolRed | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005543.1:271234-272130:- | gene-YIL044C_FaliES1 | rna-NM_001179394.3_FaliES1 | cds-NP_012220.3_FaliES1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000365.1:26751-27647:+ | gene-YIL044C_JAY291 | rna-NM_001179394.3_JAY291 | cds-NP_012220.3_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005415.1:272887-273783:- | gene-YIL044C_MUCL30387 | rna-NM_001179394.3_MUCL30387 | cds-NP_012220.3_MUCL30387 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005447.1:269490-270386:- | gene-YIL044C_MUCL30388 | rna-NM_001179394.3_MUCL30388 | cds-NP_012220.3_MUCL30388 | 98.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005287.1:270449-271345:- | gene-YIL044C_MUCL39482 | rna-NM_001179394.3_MUCL39482 | cds-NP_012220.3_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005431.1:273580-274476:- | gene-YIL044C_MUCL42920 | rna-NM_001179394.3_MUCL42920 | cds-NP_012220.3_MUCL42920 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011818.1:272950-273846:- | gene-YIL044C_NCIM3186 | rna-NM_001179394.3_NCIM3186 | cds-NP_012220.3_NCIM3186 | 98.7 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005271.1:274722-275618:- | gene-YIL044C_NCYC1407 | rna-NM_001179394.3_NCYC1407 | cds-NP_012220.3_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994148.1:267965-268861:- | gene-YIL044C_PE2H3 | rna-NM_001179394.3_PE2H3 | cds-NP_012220.3_PE2H3 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999880.1:262675-263571:- | gene-YIL044C_PE2H4 | rna-NM_001179394.3_PE2H4 | cds-NP_012220.3_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001141.2:272950-273846:- | gene-YIL044C_S288C | rna-NM_001179394.3_S288C | cds-NP_012220.3_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000031.1:52322-53218:+ | gene-YIL044C_SA1 | rna-NM_001179394.3_SA1 | cds-NP_012220.3_SA1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005495.1:269903-270799:- | gene-YIL044C_ThermosaccDry | rna-NM_001179394.3_ThermosaccDry | cds-NP_012220.3_ThermosaccDry | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005463.1:267077-267973:- | gene-YIL044C_VR1 | rna-NM_001179394.3_VR1 | cds-NP_012220.3_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000019.1:243750-244646:- | gene-YIL044C_ZTW1 | rna-NM_001179394.3_ZTW1 | cds-NP_012220.3_ZTW1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047495.1:265855-266751:- | gene-YIL044C_Sparadoxus | rna-NM_001179394.3_Sparadoxus | cds-NP_012220.3_Sparadoxus | 90.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |