Gene name: AFI1
Reference locus (S288C): YOR129C
Gene biotype: protein_coding
Description: ARF3-interacting protein 1; Arf3p polarization-specific docking factor; required for the polarized distribution of the ADP-ribosylation factor, Arf3p; participates in polarity development and maintenance of a normal haploid budding pattern; interacts with Cnm7p
Top 10 interactors (score): YEL1 (0.9); ARF3 (0.888); CNM67 (0.797); ARL1 (0.769); ICY1 (0.748); ANR2 (0.747); AVL9 (0.712); PFF1 (0.698); YNR066C (0.524); CCC1 (0.52); BUD2 (0.507); INP52 (0.481); MON1 (0.452); VTH1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005309.1:550942-553623:- | gene-YOR129C_AKU4011 | rna-NM_001183548.1_AKU4011 | cds-NP_014772.1_AKU4011 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000171.1:25650-28331:+ | gene-YOR129C_BG1 | rna-NM_001183548.1_BG1 | cds-NP_014772.1_BG1 | 99.6 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005517.1:554486-557167:- | gene-YOR129C_Bruggeman | rna-NM_001183548.1_Bruggeman | cds-NP_014772.1_Bruggeman | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005533.1:554494-557178:- | gene-YOR129C_CAT1 | rna-NM_001183548.1_CAT1 | cds-NP_014772.1_CAT1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005373.1:546504-549185:- | gene-YOR129C_CBS1585 | rna-NM_001183548.1_CBS1585 | cds-NP_014772.1_CBS1585 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005357.1:551211-553892:- | gene-YOR129C_CBS436 | rna-NM_001183548.1_CBS436 | cds-NP_014772.1_CBS436 | 99.6 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005341.1:544990-547671:- | gene-YOR129C_CBS6412 | rna-NM_001183548.1_CBS6412 | cds-NP_014772.1_CBS6412 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005325.1:552286-554967:- | gene-YOR129C_CBS6413 | rna-NM_001183548.1_CBS6413 | cds-NP_014772.1_CBS6413 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001536.1:566953-569634:- | gene-YOR129C_CENPK1137D | rna-NM_001183548.1_CENPK1137D | cds-NP_014772.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005485.1:547311-549992:- | gene-YOR129C_EthanolRed | rna-NM_001183548.1_EthanolRed | cds-NP_014772.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005549.1:551007-553688:- | gene-YOR129C_FaliES1 | rna-NM_001183548.1_FaliES1 | cds-NP_014772.1_FaliES1 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000063.1:5578-8262:+ | gene-YOR129C_JAY291 | rna-NM_001183548.1_JAY291 | cds-NP_014772.1_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005421.1:559044-561725:- | gene-YOR129C_MUCL30387 | rna-NM_001183548.1_MUCL30387 | cds-NP_014772.1_MUCL30387 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005453.1:564252-566933:- | gene-YOR129C_MUCL30388 | rna-NM_001183548.1_MUCL30388 | cds-NP_014772.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005293.1:553899-556580:- | gene-YOR129C_MUCL39482 | rna-NM_001183548.1_MUCL39482 | cds-NP_014772.1_MUCL39482 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005437.1:569945-572626:- | gene-YOR129C_MUCL42920 | rna-NM_001183548.1_MUCL42920 | cds-NP_014772.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011824.1:566766-569447:- | gene-YOR129C_NCIM3186 | rna-NM_001183548.1_NCIM3186 | cds-NP_014772.1_NCIM3186 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005277.1:560346-563027:- | gene-YOR129C_NCYC1407 | rna-NM_001183548.1_NCYC1407 | cds-NP_014772.1_NCYC1407 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994154.1:559348-562029:- | gene-YOR129C_PE2H3 | rna-NM_001183548.1_PE2H3 | cds-NP_014772.1_PE2H3 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999886.1:569725-572406:- | gene-YOR129C_PE2H4 | rna-NM_001183548.1_PE2H4 | cds-NP_014772.1_PE2H4 | 99.5 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001147.6:566877-569558:- | gene-YOR129C_S288C | rna-NM_001183548.1_S288C | cds-NP_014772.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000034.1:96416-99100:- | gene-YOR129C_SA1 | rna-NM_001183548.1_SA1 | cds-NP_014772.1_SA1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005501.1:550190-552871:- | gene-YOR129C_ThermosaccDry | rna-NM_001183548.1_ThermosaccDry | cds-NP_014772.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005469.1:552291-554975:- | gene-YOR129C_VR1 | rna-NM_001183548.1_VR1 | cds-NP_014772.1_VR1 | 99.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000032.1:284126-286807:- | gene-YOR129C_ZTW1 | rna-NM_001183548.1_ZTW1 | cds-NP_014772.1_ZTW1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047501.1:556137-558819:- | gene-YOR129C_Sparadoxus | rna-NM_001183548.1_Sparadoxus | cds-NP_014772.1_Sparadoxus | 86.2 | 99.3 | Verified | 1 | 1 | 0 | False | False | False | True | False |