Gene name: AFB1
Reference locus (S288C): YLR040C
Gene biotype: protein_coding
Description: Cell wall protein YLR040C; MATalpha-specific a-factor blocker; contributes to mating efficiency under certain conditions; localizes to the cell wall; predicted to be a GPI-attached protein; upregulated by Mcm1p-Alpha1p transcription factor; partially overlaps the dubious ORF YLR041W; Belongs to the SRP1/TIP1 family
Top 10 interactors (score): STE3 (0.908); SAG1 (0.902); MF(ALPHA)1 (0.902); MF(ALPHA)2 (0.901); HMLALPHA1 (0.728)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005306.1:211396-212070:- | gene-YLR040C_AKU4011 | rna-NM_001181927.1_AKU4011 | cds-NP_013141.1_AKU4011 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000212.1:174541-175215:- | gene-YLR040C_BG1 | rna-NM_001181927.1_BG1 | cds-NP_013141.1_BG1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005514.1:221304-221978:- | gene-YLR040C_Bruggeman | rna-NM_001181927.1_Bruggeman | cds-NP_013141.1_Bruggeman | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005530.1:221630-222304:- | gene-YLR040C_CAT1 | rna-NM_001181927.1_CAT1 | cds-NP_013141.1_CAT1 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005370.1:218534-219208:- | gene-YLR040C_CBS1585 | rna-NM_001181927.1_CBS1585 | cds-NP_013141.1_CBS1585 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005354.1:209168-209842:- | gene-YLR040C_CBS436 | rna-NM_001181927.1_CBS436 | cds-NP_013141.1_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005338.1:216943-217617:- | gene-YLR040C_CBS6412 | rna-NM_001181927.1_CBS6412 | cds-NP_013141.1_CBS6412 | 99.1 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005322.1:218795-219469:- | gene-YLR040C_CBS6413 | rna-NM_001181927.1_CBS6413 | cds-NP_013141.1_CBS6413 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001533.1:208204-208878:- | gene-YLR040C_CENPK1137D | rna-NM_001181927.1_CENPK1137D | cds-NP_013141.1_CENPK1137D | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005482.1:210920-211594:- | gene-YLR040C_EthanolRed | rna-NM_001181927.1_EthanolRed | cds-NP_013141.1_EthanolRed | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005546.1:210806-211480:- | gene-YLR040C_FaliES1 | rna-NM_001181927.1_FaliES1 | cds-NP_013141.1_FaliES1 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000289.1:4092-4766:+ | gene-YLR040C_JAY291 | rna-NM_001181927.1_JAY291 | cds-NP_013141.1_JAY291 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005418.1:218655-219329:- | gene-YLR040C_MUCL30387 | rna-NM_001181927.1_MUCL30387 | cds-NP_013141.1_MUCL30387 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005450.1:226320-226994:- | gene-YLR040C_MUCL30388 | rna-NM_001181927.1_MUCL30388 | cds-NP_013141.1_MUCL30388 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005290.1:219029-219703:- | gene-YLR040C_MUCL39482 | rna-NM_001181927.1_MUCL39482 | cds-NP_013141.1_MUCL39482 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005434.1:218934-219608:- | gene-YLR040C_MUCL42920 | rna-NM_001181927.1_MUCL42920 | cds-NP_013141.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011821.1:228882-229556:- | gene-YLR040C_NCIM3186 | rna-NM_001181927.1_NCIM3186 | cds-NP_013141.1_NCIM3186 | 98.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005274.1:211088-211762:- | gene-YLR040C_NCYC1407 | rna-NM_001181927.1_NCYC1407 | cds-NP_013141.1_NCYC1407 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994151.1:216965-217639:- | gene-YLR040C_PE2H3 | rna-NM_001181927.1_PE2H3 | cds-NP_013141.1_PE2H3 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999883.1:216706-217380:- | gene-YLR040C_PE2H4 | rna-NM_001181927.1_PE2H4 | cds-NP_013141.1_PE2H4 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001144.5:228908-229582:- | gene-YLR040C_S288C | rna-NM_001181927.1_S288C | cds-NP_013141.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000046.1:54808-55482:- | gene-YLR040C_SA1 | rna-NM_001181927.1_SA1 | cds-NP_013141.1_SA1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005498.1:210994-211668:- | gene-YLR040C_ThermosaccDry | rna-NM_001181927.1_ThermosaccDry | cds-NP_013141.1_ThermosaccDry | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005466.1:224412-225086:- | gene-YLR040C_VR1 | rna-NM_001181927.1_VR1 | cds-NP_013141.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000023.1:210339-211013:- | gene-YLR040C_ZTW1 | rna-NM_001181927.1_ZTW1 | cds-NP_013141.1_ZTW1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047498.1:219229-219903:- | gene-YLR040C_Sparadoxus | rna-NM_001181927.1_Sparadoxus | cds-NP_013141.1_Sparadoxus | 84.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |