ADH3 (YMR083W)


Gene profile

Gene name: ADH3
Reference locus (S288C): YMR083W
Gene biotype: protein_coding

Description: Alcohol dehydrogenase, propanol-preferring; Mitochondrial alcohol dehydrogenase isozyme III; involved in the shuttling of mitochondrial NADH to the cytosol under anaerobic conditions and ethanol production

Top 10 interactors (score): PDC1 (0.971); ADH4 (0.968); PDC6 (0.957); PDC5 (0.939); ARO10 (0.934); THI3 (0.903); ALD4 (0.9); ALD3 (0.883); ALD6 (0.837); ALD5 (0.801); ALD2 (0.792); HFD1 (0.75); GIS4 (0.745); PYK2 (0.739); CDC19 (0.679); PGK1 (0.662); ENO1 (0.648); TRP3 (0.631); SFA1 (0.629); ASG1 (0.619)

Homologues (species, bitscore): SORD (Homo sapiens, 92.8); Adh1 (Mus musculus, 97.1); LOC570613 (Danio rerio, 85.9); adh6 (Xenopus tropicalis, 96.3); Fdh (Drosophila melanogaster, 93.2); sodh-1 (Caenorhabditis elegans, 347.8); CAD6 (Arabidopsis thaliana, 144.8)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005307.1:472726-473853:+ gene-YMR083W_AKU4011 rna-NM_001182582.1_AKU4011 cds-NP_013800.1_AKU4011 99.8 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000201.1:69162-70289:- gene-YMR083W_BG1 rna-NM_001182582.1_BG1 cds-NP_013800.1_BG1 100.0 100.0 Verified 1 1 1 True True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005515.1:414903-416030:+ gene-YMR083W_Bruggeman rna-NM_001182582.1_Bruggeman cds-NP_013800.1_Bruggeman 99.9 100.0 Verified 1 1 1 True True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005531.1:415229-416356:+ gene-YMR083W_CAT1 rna-NM_001182582.1_CAT1 cds-NP_013800.1_CAT1 100.0 100.0 Verified 1 1 1 True True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005371.1:405666-406793:+ gene-YMR083W_CBS1585 rna-NM_001182582.1_CBS1585 cds-NP_013800.1_CBS1585 99.9 100.0 Verified 1 1 1 True True False False False
CBS436 GCA_001738355.1 Sake Asia CM005355.1:410989-412116:+ gene-YMR083W_CBS436 rna-NM_001182582.1_CBS436 cds-NP_013800.1_CBS436 100.0 100.0 Mismatch 1 1 1 True True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005339.1:518740-519867:+ gene-YMR083W_CBS6412 rna-NM_001182582.1_CBS6412 cds-NP_013800.1_CBS6412 99.9 100.0 Mismatch 1 1 1 True True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005323.1:404923-406050:+ gene-YMR083W_CBS6413 rna-NM_001182582.1_CBS6413 cds-NP_013800.1_CBS6413 99.9 100.0 Verified 1 1 1 True True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001534.1:428891-430018:+ gene-YMR083W_CENPK1137D rna-NM_001182582.1_CENPK1137D cds-NP_013800.1_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005483.1:405556-406683:+ gene-YMR083W_EthanolRed rna-NM_001182582.1_EthanolRed cds-NP_013800.1_EthanolRed 99.9 100.0 Verified 1 1 1 True True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005547.1:408722-409849:+ gene-YMR083W_FaliES1 rna-NM_001182582.1_FaliES1 cds-NP_013800.1_FaliES1 99.9 100.0 Verified 1 1 1 True True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000033.1:27363-28490:- gene-YMR083W_JAY291 rna-NM_001182582.1_JAY291 cds-NP_013800.1_JAY291 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005419.1:411163-412290:+ gene-YMR083W_MUCL30387 rna-NM_001182582.1_MUCL30387 cds-NP_013800.1_MUCL30387 100.0 100.0 Verified 1 1 1 True True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005451.1:416065-417192:+ gene-YMR083W_MUCL30388 rna-NM_001182582.1_MUCL30388 cds-NP_013800.1_MUCL30388 99.9 100.0 Verified 1 1 1 True True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005291.1:405954-407081:+ gene-YMR083W_MUCL39482 rna-NM_001182582.1_MUCL39482 cds-NP_013800.1_MUCL39482 99.9 100.0 Verified 1 1 1 True True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005435.1:412642-413769:+ gene-YMR083W_MUCL42920 rna-NM_001182582.1_MUCL42920 cds-NP_013800.1_MUCL42920 99.9 100.0 Verified 1 1 1 True True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011822.1:434742-435869:+ gene-YMR083W_NCIM3186 rna-NM_001182582.1_NCIM3186 cds-NP_013800.1_NCIM3186 99.9 100.0 Verified 1 1 1 True True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005275.1:405869-406996:+ gene-YMR083W_NCYC1407 rna-NM_001182582.1_NCYC1407 cds-NP_013800.1_NCYC1407 99.9 100.0 Verified 1 1 1 True True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994152.1:411589-412716:+ gene-YMR083W_PE2H3 rna-NM_001182582.1_PE2H3 cds-NP_013800.1_PE2H3 100.0 100.0 Verified 1 1 1 True True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999884.1:417684-418811:+ gene-YMR083W_PE2H4 rna-NM_001182582.1_PE2H4 cds-NP_013800.1_PE2H4 100.0 100.0 Verified 1 1 1 True True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001145.3:434788-435915:+ gene-YMR083W_S288C rna-NM_001182582.1_S288C cds-NP_013800.1_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000005.1:114253-115380:- gene-YMR083W_SA1 rna-NM_001182582.1_SA1 cds-NP_013800.1_SA1 100.0 100.0 Verified 1 1 1 True True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005499.1:406525-407652:+ gene-YMR083W_ThermosaccDry rna-NM_001182582.1_ThermosaccDry cds-NP_013800.1_ThermosaccDry 99.9 100.0 Verified 1 1 1 True True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005467.1:418175-419302:+ gene-YMR083W_VR1 rna-NM_001182582.1_VR1 cds-NP_013800.1_VR1 100.0 100.0 Verified 1 1 1 True True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000027.1:382797-383924:+ gene-YMR083W_ZTW1 rna-NM_001182582.1_ZTW1 cds-NP_013800.1_ZTW1 100.0 100.0 Verified 1 1 1 True True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047499.1:419288-420415:+ gene-YMR083W_Sparadoxus rna-NM_001182582.1_Sparadoxus cds-NP_013800.1_Sparadoxus 92.4 100.0 Verified 1 1 1 False True False False False

Additional files