Gene name: ADF1
Reference locus (S288C): YCL058W-A
Gene biotype: protein_coding
Description: Antisense of depressing factor protein 1; Transcriptional repressor encoded by the FYV5 antisense strand; negatively regulates transcription of FYV5 by binding to the promoter on the sense strand
Top 10 interactors (score): FYV5 (0.747); AUA1 (0.744); IMO32 (0.711); VAM10 (0.71); NAG1 (0.699); PRP38 (0.67); HUR1 (0.67); EMI1 (0.657); YKL075C (0.651); BUD25 (0.638); RSM7 (0.617); TAD3 (0.616); WWM1 (0.614); HEM14 (0.572); YBR099C (0.572); NKP2 (0.572); SET6 (0.57); MATALPHA2 (0.555); DCR2 (0.529); HMLALPHA2 (0.526)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005297.1:24877-25218:+ | gene-YCL058W-A_AKU4011 | rna-NM_001184528.1_AKU4011 | cds-NP_001018031.2_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000090.1:9791-10132:+ | gene-YCL058W-A_BG1 | rna-NM_001184528.1_BG1 | cds-NP_001018031.2_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005505.1:12292-12633:+ | gene-YCL058W-A_Bruggeman | rna-NM_001184528.1_Bruggeman | cds-NP_001018031.2_Bruggeman | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005521.1:24762-25103:+ | gene-YCL058W-A_CAT1 | rna-NM_001184528.1_CAT1 | cds-NP_001018031.2_CAT1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005361.1:25562-25903:+ | gene-YCL058W-A_CBS1585 | rna-NM_001184528.1_CBS1585 | cds-NP_001018031.2_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005345.1:24108-24449:+ | gene-YCL058W-A_CBS436 | rna-NM_001184528.1_CBS436 | cds-NP_001018031.2_CBS436 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005329.1:13318-13659:+ | gene-YCL058W-A_CBS6412 | rna-NM_001184528.1_CBS6412 | cds-NP_001018031.2_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005313.1:24334-24675:+ | gene-YCL058W-A_CBS6413 | rna-NM_001184528.1_CBS6413 | cds-NP_001018031.2_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001524.1:23179-23520:+ | gene-YCL058W-A_CENPK1137D | rna-NM_001184528.1_CENPK1137D | cds-NP_001018031.2_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005473.1:23110-23451:+ | gene-YCL058W-A_EthanolRed | rna-NM_001184528.1_EthanolRed | cds-NP_001018031.2_EthanolRed | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005537.1:23872-24213:+ | gene-YCL058W-A_FaliES1 | rna-NM_001184528.1_FaliES1 | cds-NP_001018031.2_FaliES1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000225.1:60122-60463:- | gene-YCL058W-A_JAY291 | rna-NM_001184528.1_JAY291 | cds-NP_001018031.2_JAY291 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005409.1:11294-11635:+ | gene-YCL058W-A_MUCL30387 | rna-NM_001184528.1_MUCL30387 | cds-NP_001018031.2_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005441.1:11589-11930:+ | gene-YCL058W-A_MUCL30388 | rna-NM_001184528.1_MUCL30388 | cds-NP_001018031.2_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005281.1:25946-26287:+ | gene-YCL058W-A_MUCL39482 | rna-NM_001184528.1_MUCL39482 | cds-NP_001018031.2_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005425.1:11869-12210:+ | gene-YCL058W-A_MUCL42920 | rna-NM_001184528.1_MUCL42920 | cds-NP_001018031.2_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011812.1:23216-23557:+ | gene-YCL058W-A_NCIM3186 | rna-NM_001184528.1_NCIM3186 | cds-NP_001018031.2_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005265.1:26274-26615:+ | gene-YCL058W-A_NCYC1407 | rna-NM_001184528.1_NCYC1407 | cds-NP_001018031.2_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994142.1:24043-24384:+ | gene-YCL058W-A_PE2H3 | rna-NM_001184528.1_PE2H3 | cds-NP_001018031.2_PE2H3 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999874.1:24000-24341:+ | gene-YCL058W-A_PE2H4 | rna-NM_001184528.1_PE2H4 | cds-NP_001018031.2_PE2H4 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001135.5:23584-23925:+ | gene-YCL058W-A_S288C | rna-NM_001184528.1_S288C | cds-NP_001018031.2_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000061.1:10735-11076:+ | gene-YCL058W-A_SA1 | rna-NM_001184528.1_SA1 | cds-NP_001018031.2_SA1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005489.1:24191-24532:+ | gene-YCL058W-A_ThermosaccDry | rna-NM_001184528.1_ThermosaccDry | cds-NP_001018031.2_ThermosaccDry | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005457.1:29478-29819:+ | gene-YCL058W-A_VR1 | rna-NM_001184528.1_VR1 | cds-NP_001018031.2_VR1 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000004.1:24417-24758:+ | gene-YCL058W-A_ZTW1 | rna-NM_001184528.1_ZTW1 | cds-NP_001018031.2_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047489.1:54106-54447:+ | gene-YCL058W-A_Sparadoxus | rna-NM_001184528.1_Sparadoxus | cds-NP_001018031.2_Sparadoxus | 88.5 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |