ADE2 (YOR128C)


Gene profile

Gene name: ADE2
Reference locus (S288C): YOR128C
Gene biotype: protein_coding

Description: Phosphoribosylaminoimidazole carboxylase; catalyzes a step in the 'de novo' purine nucleotide biosynthetic pathway; red pigment accumulates in mutant cells deprived of adenine

Top 10 interactors (score): ADE5,7 (0.999); ADE1 (0.996); ADE8 (0.996); URA3 (0.994); ADE6 (0.983); ADE4 (0.973); HIS3 (0.973); LEU2 (0.972); TRP1 (0.969); ADE17 (0.963); LYS2 (0.958); GUA1 (0.951); CAN1 (0.951); ADE3 (0.946); HPT1 (0.945); HIS4 (0.938); ADE13 (0.934); XPT1 (0.899); ADE16 (0.891); BAS1 (0.863)

Homologues (species, bitscore): AT2G37690 (Arabidopsis thaliana, 524.2)

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser


Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia CM005309.1:548541-550256:- gene-YOR128C_AKU4011 rna-NM_001183547.3_AKU4011 cds-NP_014771.3_AKU4011 99.7 100.0 Verified 1 1 1 False True False False False
BG1 GCA_001932575.1 Bioethanol South America MSHP01000171.1:29017-30732:+ gene-YOR128C_BG1 rna-NM_001183547.3_BG1 cds-NP_014771.3_BG1 99.5 100.0 Verified 1 1 1 False True False False False
Bruggeman GCA_001738585.1 Bread Not Applicable CM005517.1:552085-553800:- gene-YOR128C_Bruggeman rna-NM_001183547.3_Bruggeman cds-NP_014771.3_Bruggeman 99.5 100.0 Verified 1 1 1 False True False False False
CAT1 GCA_001738705.1 Bioethanol South America CM005533.1:552093-553808:- gene-YOR128C_CAT1 rna-NM_001183547.3_CAT1 cds-NP_014771.3_CAT1 99.5 100.0 Verified 1 1 1 False True False False False
CBS1585 GCA_001738375.1 Sake Asia CM005373.1:544103-545818:- gene-YOR128C_CBS1585 rna-NM_001183547.3_CBS1585 cds-NP_014771.3_CBS1585 99.7 100.0 Verified 1 1 1 False True False False False
CBS436 GCA_001738355.1 Sake Asia CM005357.1:548810-550525:- gene-YOR128C_CBS436 rna-NM_001183547.3_CBS436 cds-NP_014771.3_CBS436 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6412 GCA_001738345.1 Sake Asia CM005341.1:542589-544304:- gene-YOR128C_CBS6412 rna-NM_001183547.3_CBS6412 cds-NP_014771.3_CBS6412 99.7 100.0 Mismatch 1 1 1 False True False False False
CBS6413 GCA_001738265.1 Sake Asia CM005325.1:549885-551600:- gene-YOR128C_CBS6413 rna-NM_001183547.3_CBS6413 cds-NP_014771.3_CBS6413 99.7 100.0 Verified 1 1 1 False True False False False
CENPK1137D GCA_000269885.1 Laboratory Not Applicable CM001536.1:564552-566267:- gene-YOR128C_CENPK1137D rna-NM_001183547.3_CENPK1137D cds-NP_014771.3_CENPK1137D 100.0 100.0 Verified 1 1 1 True True False False False
EthanolRed GCA_001738615.1 Bioethanol Asia CM005485.1:544910-546625:- gene-YOR128C_EthanolRed rna-NM_001183547.3_EthanolRed cds-NP_014771.3_EthanolRed 99.6 100.0 Verified 1 1 1 False True False False False
FaliES1 GCA_001738715.1 Bioethanol Asia CM005549.1:548606-550321:- gene-YOR128C_FaliES1 rna-NM_001183547.3_FaliES1 cds-NP_014771.3_FaliES1 99.6 100.0 Verified 1 1 1 False True False False False
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000063.1:8948-10663:+ gene-YOR128C_JAY291 rna-NM_001183547.3_JAY291 cds-NP_014771.3_JAY291 99.6 100.0 Verified 1 1 1 False True False False False
MUCL30387 GCA_001738515.1 Bread Europe CM005421.1:556643-558358:- gene-YOR128C_MUCL30387 rna-NM_001183547.3_MUCL30387 cds-NP_014771.3_MUCL30387 99.5 100.0 Verified 1 1 1 False True False False False
MUCL30388 GCA_001738495.1 Bread Europe CM005453.1:561851-563566:- gene-YOR128C_MUCL30388 rna-NM_001183547.3_MUCL30388 cds-NP_014771.3_MUCL30388 99.8 100.0 Verified 1 1 1 False True False False False
MUCL39482 GCA_001738235.1 Sake Asia CM005293.1:551498-553213:- gene-YOR128C_MUCL39482 rna-NM_001183547.3_MUCL39482 cds-NP_014771.3_MUCL39482 99.7 100.0 Verified 1 1 1 False True False False False
MUCL42920 GCA_001738485.1 Bread Europe CM005437.1:567544-569259:- gene-YOR128C_MUCL42920 rna-NM_001183547.3_MUCL42920 cds-NP_014771.3_MUCL42920 99.7 100.0 Verified 1 1 1 False True False False False
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011824.1:564365-566080:- gene-YOR128C_NCIM3186 rna-NM_001183547.3_NCIM3186 cds-NP_014771.3_NCIM3186 99.5 100.0 Verified 1 1 1 False True False False False
NCYC1407 GCA_001738225.1 Sake Asia CM005277.1:557945-559660:- gene-YOR128C_NCYC1407 rna-NM_001183547.3_NCYC1407 cds-NP_014771.3_NCYC1407 99.7 100.0 Verified 1 1 1 False True False False False
PE2H3 GCA_905220325.1 Bioethanol South America HG994154.1:556947-558662:- gene-YOR128C_PE2H3 rna-NM_001183547.3_PE2H3 cds-NP_014771.3_PE2H3 99.5 100.0 Verified 1 1 1 False True False False False
PE2H4 GCA_905220315.1 Bioethanol South America LR999886.1:567324-569039:- gene-YOR128C_PE2H4 rna-NM_001183547.3_PE2H4 cds-NP_014771.3_PE2H4 99.5 100.0 Verified 1 1 1 False True False False False
S288C GCF_000146045.2 Laboratory Not applicable NC_001147.6:564476-566191:- gene-YOR128C_S288C rna-NM_001183547.3_S288C cds-NP_014771.3_S288C 100.0 100.0 Verified 1 1 1 True True False False False
SA1 GCA_004114265.1 Bioethanol South America SDIA01000034.1:94015-95730:- gene-YOR128C_SA1 rna-NM_001183547.3_SA1 cds-NP_014771.3_SA1 99.6 100.0 Verified 1 1 1 False True False False False
ThermosaccDry GCA_001738605.1 Bioethanol Asia CM005501.1:547789-549504:- gene-YOR128C_ThermosaccDry rna-NM_001183547.3_ThermosaccDry cds-NP_014771.3_ThermosaccDry 99.6 100.0 Verified 1 1 1 False True False False False
VR1 GCA_001738595.1 Bioethanol South America CM005469.1:549890-551605:- gene-YOR128C_VR1 rna-NM_001183547.3_VR1 cds-NP_014771.3_VR1 99.6 100.0 Verified 1 1 1 False True False False False
ZTW1 GCA_000308935.1 Bioethanol Asia AMDD01000032.1:281725-283440:- gene-YOR128C_ZTW1 rna-NM_001183547.3_ZTW1 cds-NP_014771.3_ZTW1 99.7 100.0 Verified 1 1 1 False True False False False
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_047501.1:553737-555452:- gene-YOR128C_Sparadoxus rna-NM_001183547.3_Sparadoxus cds-NP_014771.3_Sparadoxus 91.8 100.0 Verified 1 1 1 False True False False False

Additional files