Gene name: ACT1
Reference locus (S288C): YFL039C
Gene biotype: protein_coding
Description: Actin, other eukaryote; Actin; structural protein involved in cell polarization, endocytosis, and other cytoskeletal functions
Top 10 interactors (score): RVB2 (0.999); MYO2 (0.999); SRV2 (0.999); MYO1 (0.999); SAC6 (0.999); CMD1 (0.999); ABP1 (0.999); RVB1 (0.999); SWR1 (0.999); TWF1 (0.999); TPM2 (0.999); LAS17 (0.999); BNI1 (0.999); COF1 (0.999); PFY1 (0.999); BUD6 (0.999); TPM1 (0.999); TEF1 (0.999); EAF5 (0.998); VRP1 (0.998)
Homologues (species, bitscore): ACTB (Homo sapiens, 721.8); Actg1 (Mus musculus, 721.8); actb1 (Danio rerio, 721.1); actb (Xenopus tropicalis, 723.4); Act5C (Drosophila melanogaster, 721.5); act-4 (Caenorhabditis elegans, 723.0); ACT11 (Arabidopsis thaliana, 689.9)
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005300.1:49595-51031:- | gene-YFL039C_AKU4011 | rna-NM_001179927.1_AKU4011 | cds-NP_116614.1_AKU4011 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000182.1:18757-20193:+ | gene-YFL039C_BG1 | rna-NM_001179927.1_BG1 | cds-NP_116614.1_BG1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005508.1:48478-49915:- | gene-YFL039C_Bruggeman | rna-NM_001179927.1_Bruggeman | cds-NP_116614.1_Bruggeman | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005524.1:53365-54801:- | gene-YFL039C_CAT1 | rna-NM_001179927.1_CAT1 | cds-NP_116614.1_CAT1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005364.1:50272-51707:- | gene-YFL039C_CBS1585 | rna-NM_001179927.1_CBS1585 | cds-NP_116614.1_CBS1585 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005348.1:23911-25348:- | gene-YFL039C_CBS436 | rna-NM_001179927.1_CBS436 | cds-NP_116614.1_CBS436 | 99.9 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005332.1:50512-51948:- | gene-YFL039C_CBS6412 | rna-NM_001179927.1_CBS6412 | cds-NP_116614.1_CBS6412 | 100.0 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005316.1:52673-54107:- | gene-YFL039C_CBS6413 | rna-NM_001179927.1_CBS6413 | cds-NP_116614.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001527.1:49586-51021:- | gene-YFL039C_CENPK1137D | rna-NM_001179927.1_CENPK1137D | cds-NP_116614.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005476.1:48939-50374:- | gene-YFL039C_EthanolRed | rna-NM_001179927.1_EthanolRed | cds-NP_116614.1_EthanolRed | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005540.1:50147-51583:- | gene-YFL039C_FaliES1 | rna-NM_001179927.1_FaliES1 | cds-NP_116614.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000448.1:58605-60041:- | gene-YFL039C_JAY291 | rna-NM_001179927.1_JAY291 | cds-NP_116614.1_JAY291 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005412.1:50566-52001:- | gene-YFL039C_MUCL30387 | rna-NM_001179927.1_MUCL30387 | cds-NP_116614.1_MUCL30387 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005444.1:48467-49902:- | gene-YFL039C_MUCL30388 | rna-NM_001179927.1_MUCL30388 | cds-NP_116614.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005284.1:48788-50223:- | gene-YFL039C_MUCL39482 | rna-NM_001179927.1_MUCL39482 | cds-NP_116614.1_MUCL39482 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005428.1:46496-47931:- | gene-YFL039C_MUCL42920 | rna-NM_001179927.1_MUCL42920 | cds-NP_116614.1_MUCL42920 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011815.1:53259-54695:- | gene-YFL039C_NCIM3186 | rna-NM_001179927.1_NCIM3186 | cds-NP_116614.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005268.1:49861-51296:- | gene-YFL039C_NCYC1407 | rna-NM_001179927.1_NCYC1407 | cds-NP_116614.1_NCYC1407 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994145.1:69759-71195:- | gene-YFL039C_PE2H3 | rna-NM_001179927.1_PE2H3 | cds-NP_116614.1_PE2H3 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999877.1:69310-70746:- | gene-YFL039C_PE2H4 | rna-NM_001179927.1_PE2H4 | cds-NP_116614.1_PE2H4 | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001138.5:53260-54696:- | gene-YFL039C_S288C | rna-NM_001179927.1_S288C | cds-NP_116614.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000004.1:280939-282374:+ | gene-YFL039C_SA1 | rna-NM_001179927.1_SA1 | cds-NP_116614.1_SA1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005492.1:49335-50771:- | gene-YFL039C_ThermosaccDry | rna-NM_001179927.1_ThermosaccDry | cds-NP_116614.1_ThermosaccDry | 99.9 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005460.1:57883-59319:- | gene-YFL039C_VR1 | rna-NM_001179927.1_VR1 | cds-NP_116614.1_VR1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000012.1:34632-36067:- | gene-YFL039C_ZTW1 | rna-NM_001179927.1_ZTW1 | cds-NP_116614.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047492.1:73692-75120:- | gene-YFL039C_Sparadoxus | rna-NM_001179927.1_Sparadoxus | cds-NP_116614.1_Sparadoxus | 97.5 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |