Gene name: ACF4
Reference locus (S288C): YJR083C
Gene biotype: protein_coding
Description: Assembly-complementing factor 4; Protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin cytoskeleton organization; potential Cdc28p substrate
Top 10 interactors (score): RVS167 (0.782); TMA16 (0.748); YSC84 (0.697); LSB3 (0.666); ACF2 (0.659); AIM3 (0.655); ARL3 (0.574); ARK1 (0.573); ZEO1 (0.573); APP1 (0.572); APL3 (0.571); RGI2 (0.402)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:554134-555063:- | gene-YJR083C_AKU4011 | rna-NM_001181740.1_AKU4011 | cds-NP_012616.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:52507-53436:+ | gene-YJR083C_BG1 | rna-NM_001181740.1_BG1 | cds-NP_012616.1_BG1 | 99.6 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:567650-568579:- | gene-YJR083C_Bruggeman | rna-NM_001181740.1_Bruggeman | cds-NP_012616.1_Bruggeman | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:572051-572980:- | gene-YJR083C_CAT1 | rna-NM_001181740.1_CAT1 | cds-NP_012616.1_CAT1 | 99.4 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:566198-567127:- | gene-YJR083C_CBS1585 | rna-NM_001181740.1_CBS1585 | cds-NP_012616.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:584273-585202:- | gene-YJR083C_CBS436 | rna-NM_001181740.1_CBS436 | cds-NP_012616.1_CBS436 | 99.2 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:553347-554276:- | gene-YJR083C_CBS6412 | rna-NM_001181740.1_CBS6412 | cds-NP_012616.1_CBS6412 | 99.8 | 100.0 | Mismatch | 1 | 1 | 1 | False | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:555642-556571:- | gene-YJR083C_CBS6413 | rna-NM_001181740.1_CBS6413 | cds-NP_012616.1_CBS6413 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:564964-565893:- | gene-YJR083C_CENPK1137D | rna-NM_001181740.1_CENPK1137D | cds-NP_012616.1_CENPK1137D | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:558526-559455:- | gene-YJR083C_EthanolRed | rna-NM_001181740.1_EthanolRed | cds-NP_012616.1_EthanolRed | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:569992-570921:- | gene-YJR083C_FaliES1 | rna-NM_001181740.1_FaliES1 | cds-NP_012616.1_FaliES1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:118463-119392:+ | gene-YJR083C_JAY291 | rna-NM_001181740.1_JAY291 | cds-NP_012616.1_JAY291 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | CM005416.1:568179-569108:- | gene-YJR083C_MUCL30387 | rna-NM_001181740.1_MUCL30387 | cds-NP_012616.1_MUCL30387 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:565475-566404:- | gene-YJR083C_MUCL30388 | rna-NM_001181740.1_MUCL30388 | cds-NP_012616.1_MUCL30388 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:559659-560588:- | gene-YJR083C_MUCL39482 | rna-NM_001181740.1_MUCL39482 | cds-NP_012616.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:563906-564835:- | gene-YJR083C_MUCL42920 | rna-NM_001181740.1_MUCL42920 | cds-NP_012616.1_MUCL42920 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:582587-583516:- | gene-YJR083C_NCIM3186 | rna-NM_001181740.1_NCIM3186 | cds-NP_012616.1_NCIM3186 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:557224-558153:- | gene-YJR083C_NCYC1407 | rna-NM_001181740.1_NCYC1407 | cds-NP_012616.1_NCYC1407 | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:575118-576047:- | gene-YJR083C_PE2H3 | rna-NM_001181740.1_PE2H3 | cds-NP_012616.1_PE2H3 | 98.9 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:568812-569741:- | gene-YJR083C_PE2H4 | rna-NM_001181740.1_PE2H4 | cds-NP_012616.1_PE2H4 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:582608-583537:- | gene-YJR083C_S288C | rna-NM_001181740.1_S288C | cds-NP_012616.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:41188-42117:- | gene-YJR083C_SA1 | rna-NM_001181740.1_SA1 | cds-NP_012616.1_SA1 | 99.3 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:563925-564854:- | gene-YJR083C_ThermosaccDry | rna-NM_001181740.1_ThermosaccDry | cds-NP_012616.1_ThermosaccDry | 99.8 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:566106-567035:- | gene-YJR083C_VR1 | rna-NM_001181740.1_VR1 | cds-NP_012616.1_VR1 | 99.2 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:543323-544252:- | gene-YJR083C_ZTW1 | rna-NM_001181740.1_ZTW1 | cds-NP_012616.1_ZTW1 | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:576702-577631:- | gene-YJR083C_Sparadoxus | rna-NM_001181740.1_Sparadoxus | cds-NP_012616.1_Sparadoxus | 88.0 | 99.8 | Verified | 1 | 1 | 1 | False | True | False | False | False |