Gene name: ABM1
Reference locus (S288C): YJR108W
Gene biotype: protein_coding
Description: Aberrant microtubules protein 1; Protein of unknown function; required for normal microtubule organization
Top 10 interactors (score): LIH1 (0.93); YPR071W (0.813); IRC10 (0.711); YML020W (0.616); YCL048W-A (0.592); YLR146W-A (0.566); YDR524C-B (0.485); ARP10 (0.485); LSM2 (0.483); PEF1 (0.45); YSW1 (0.45); GTO1 (0.45)
Homologues (species, bitscore): Unknown
External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser
| strain | assembly | application | macro_region | gene_coord | geneID | rnaID | protID | %id | %cov_exon | status | copyNumber | copyID | nORFs | match_ref_CDS | validORF | missing_startCodon | missing_stopCodon | outOfFrame_stopCodon |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AKU4011 | GCA_001738255.1 | Sake | Asia | CM005304.1:600216-600587:+ | gene-YJR108W_AKU4011 | rna-NM_001181766.1_AKU4011 | cds-NP_012642.1_AKU4011 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| BG1 | GCA_001932575.1 | Bioethanol | South America | MSHP01000190.1:6723-7063:- | gene-YJR108W_BG1 | rna-NM_001181766.1_BG1 | cds-NP_012642.1_BG1 | 83.8 | 90.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| Bruggeman | GCA_001738585.1 | Bread | Not Applicable | CM005512.1:615944-616315:+ | gene-YJR108W_Bruggeman | rna-NM_001181766.1_Bruggeman | cds-NP_012642.1_Bruggeman | 98.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| CAT1 | GCA_001738705.1 | Bioethanol | South America | CM005528.1:619738-620078:+ | gene-YJR108W_CAT1 | rna-NM_001181766.1_CAT1 | cds-NP_012642.1_CAT1 | 84.1 | 89.7 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| CBS1585 | GCA_001738375.1 | Sake | Asia | CM005368.1:612272-612643:+ | gene-YJR108W_CBS1585 | rna-NM_001181766.1_CBS1585 | cds-NP_012642.1_CBS1585 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CBS436 | GCA_001738355.1 | Sake | Asia | CM005352.1:631177-631517:+ | gene-YJR108W_CBS436 | rna-NM_001181766.1_CBS436 | cds-NP_012642.1_CBS436 | 84.1 | 89.7 | Mismatch | 1 | 1 | 0 | False | False | True | False | False |
| CBS6412 | GCA_001738345.1 | Sake | Asia | CM005336.1:599419-599790:+ | gene-YJR108W_CBS6412 | rna-NM_001181766.1_CBS6412 | cds-NP_012642.1_CBS6412 | 99.7 | 100.0 | Mismatch | 1 | 1 | 1 | True | True | False | False | False |
| CBS6413 | GCA_001738265.1 | Sake | Asia | CM005320.1:601680-602051:+ | gene-YJR108W_CBS6413 | rna-NM_001181766.1_CBS6413 | cds-NP_012642.1_CBS6413 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| CENPK1137D | GCA_000269885.1 | Laboratory | Not Applicable | CM001531.1:611030-611401:+ | gene-YJR108W_CENPK1137D | rna-NM_001181766.1_CENPK1137D | cds-NP_012642.1_CENPK1137D | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| EthanolRed | GCA_001738615.1 | Bioethanol | Asia | CM005480.1:604634-605005:+ | gene-YJR108W_EthanolRed | rna-NM_001181766.1_EthanolRed | cds-NP_012642.1_EthanolRed | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| FaliES1 | GCA_001738715.1 | Bioethanol | Asia | CM005544.1:616100-616471:+ | gene-YJR108W_FaliES1 | rna-NM_001181766.1_FaliES1 | cds-NP_012642.1_FaliES1 | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| JAY291 | GCA_000182315.2 | Bioethanol | South America | ACFL01000054.1:72664-73004:- | gene-YJR108W_JAY291 | rna-NM_001181766.1_JAY291 | cds-NP_012642.1_JAY291 | 83.8 | 90.0 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| MUCL30387 | GCA_001738515.1 | Bread | Europe | MBVX01000193.1:320-691:+ | gene-YJR108W_MUCL30387 | rna-NM_001181766.1_MUCL30387 | cds-NP_012642.1_MUCL30387 | 98.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| MUCL30388 | GCA_001738495.1 | Bread | Europe | CM005448.1:612463-612834:+ | gene-YJR108W_MUCL30388 | rna-NM_001181766.1_MUCL30388 | cds-NP_012642.1_MUCL30388 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL39482 | GCA_001738235.1 | Sake | Asia | CM005288.1:605740-606111:+ | gene-YJR108W_MUCL39482 | rna-NM_001181766.1_MUCL39482 | cds-NP_012642.1_MUCL39482 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| MUCL42920 | GCA_001738485.1 | Bread | Europe | CM005432.1:610242-610613:+ | gene-YJR108W_MUCL42920 | rna-NM_001181766.1_MUCL42920 | cds-NP_012642.1_MUCL42920 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| NCIM3186 | GCA_001029075.1 | Bioethanol | Asia | CP011819.1:628691-629062:+ | gene-YJR108W_NCIM3186 | rna-NM_001181766.1_NCIM3186 | cds-NP_012642.1_NCIM3186 | 98.6 | 100.0 | Verified | 1 | 1 | 0 | False | False | False | True | False |
| NCYC1407 | GCA_001738225.1 | Sake | Asia | CM005272.1:603298-603669:+ | gene-YJR108W_NCYC1407 | rna-NM_001181766.1_NCYC1407 | cds-NP_012642.1_NCYC1407 | 99.7 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| PE2H3 | GCA_905220325.1 | Bioethanol | South America | HG994149.1:621511-621851:+ | gene-YJR108W_PE2H3 | rna-NM_001181766.1_PE2H3 | cds-NP_012642.1_PE2H3 | 84.1 | 89.7 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| PE2H4 | GCA_905220315.1 | Bioethanol | South America | LR999881.1:615200-615540:+ | gene-YJR108W_PE2H4 | rna-NM_001181766.1_PE2H4 | cds-NP_012642.1_PE2H4 | 84.1 | 89.7 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| S288C | GCF_000146045.2 | Laboratory | Not applicable | NC_001142.9:628712-629083:+ | gene-YJR108W_S288C | rna-NM_001181766.1_S288C | cds-NP_012642.1_S288C | 100.0 | 100.0 | Verified | 1 | 1 | 1 | True | True | False | False | False |
| SA1 | GCA_004114265.1 | Bioethanol | South America | SDIA01000038.1:87585-87925:+ | gene-YJR108W_SA1 | rna-NM_001181766.1_SA1 | cds-NP_012642.1_SA1 | 84.1 | 89.7 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ThermosaccDry | GCA_001738605.1 | Bioethanol | Asia | CM005496.1:610034-610405:+ | gene-YJR108W_ThermosaccDry | rna-NM_001181766.1_ThermosaccDry | cds-NP_012642.1_ThermosaccDry | 99.1 | 100.0 | Verified | 1 | 1 | 1 | False | True | False | False | False |
| VR1 | GCA_001738595.1 | Bioethanol | South America | CM005464.1:612455-612795:+ | gene-YJR108W_VR1 | rna-NM_001181766.1_VR1 | cds-NP_012642.1_VR1 | 84.1 | 89.7 | Verified | 1 | 1 | 0 | False | False | True | False | False |
| ZTW1 | GCA_000308935.1 | Bioethanol | Asia | AMDD01000021.1:589399-589770:+ | gene-YJR108W_ZTW1 | rna-NM_001181766.1_ZTW1 | cds-NP_012642.1_ZTW1 | 98.9 | 100.0 | Unannotated | 1 | 1 | 0 | False | False | False | False | True |
| Sparadoxus | GCF_002079055.1 | Not applicable | Not applicable | NC_047496.1:623312-623685:+ | gene-YJR108W_Sparadoxus | rna-NM_001181766.1_Sparadoxus | cds-NP_012642.1_Sparadoxus | 53.7 | 79.5 | Unannotated | 1 | 1 | 0 | False | False | False | True | False |