21S_RRNA (Q0158)

Gene profile

Gene name: 21S_RRNA
Reference locus (S288C): Q0158
Gene biotype: rRNA

Description: Unknown

Top 10 interactors (score): Unknown

Homologues (species, bitscore): Unknown

External links:
Saccharomyces genome database (SGD)
STRING database
BioGRID
UniProt Knowledgebase
Kyoto encyclopedia of genes and genomes (KEGG)
Reactome
UCSC Genome Browser

Comparative analysis of strains

Search table

strain assembly application macro_region gene_coord geneID rnaID protID %id %cov_exon status copyNumber copyID nORFs match_ref_CDS validORF missing_startCodon missing_stopCodon outOfFrame_stopCodon
AKU4011 GCA_001738255.1 Sake Asia MBVO01000055.1:46770-49416:+ gene-Q0158_AKU4011 rna-Q0158_AKU4011 Unknown 58.9 59.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Bruggeman GCA_001738585.1 Bread Not Applicable MBVY01000033.1:56359-59526:+ gene-Q0158_Bruggeman rna-Q0158_Bruggeman Unknown 71.0 71.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CAT1 GCA_001738705.1 Bioethanol South America MBWC01000376.1:46751-51051:+ gene-Q0158_CAT1 rna-Q0158_CAT1 Unknown 94.4 95.7 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS1585 GCA_001738375.1 Sake Asia MBVS01000067.1:46170-48811:+ gene-Q0158_CBS1585 rna-Q0158_CBS1585 Unknown 58.7 59.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS436 GCA_001738355.1 Sake Asia MBVR01000053.1:53879-57213:+ gene-Q0158_CBS436 rna-Q0158_CBS436 Unknown 72.9 74.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6412 GCA_001738345.1 Sake Asia MBVQ01000062.1:42399-45029:+ gene-Q0158_CBS6412 rna-Q0158_CBS6412 Unknown 58.9 59.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
CBS6413 GCA_001738265.1 Sake Asia MBVP01000101.1:79451-82080:+ gene-Q0158_CBS6413 rna-Q0158_CBS6413 Unknown 58.9 59.1 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
EthanolRed GCA_001738615.1 Bioethanol Asia MBWB01000074.1:41610-44234:+ gene-Q0158_EthanolRed rna-Q0158_EthanolRed Unknown 58.8 59.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
JAY291 GCA_000182315.2 Bioethanol South America ACFL01000252.1:223-4572:- gene-Q0158_JAY291 rna-Q0158_JAY291 Unknown 97.6 97.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL30387 GCA_001738515.1 Bread Europe MBVX01000168.1:53078-55723:+ gene-Q0158_MUCL30387 rna-Q0158_MUCL30387 Unknown 58.8 59.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL39482 GCA_001738235.1 Sake Asia MBVN01000090.1:38463-41127:+ gene-Q0158_MUCL39482 rna-Q0158_MUCL39482 Unknown 58.7 59.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
MUCL42920 GCA_001738485.1 Bread Europe MBVV01000309.1:54808-58011:+ gene-Q0158_MUCL42920 rna-Q0158_MUCL42920 Unknown 71.8 72.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCIM3186 GCA_001029075.1 Bioethanol Asia CP011826.1:58161-62161:+ gene-Q0158_NCIM3186 rna-Q0158_NCIM3186 Unknown 38.7 66.3 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
NCYC1407 GCA_001738225.1 Sake Asia MBVM01000068.1:2854-4330:+ gene-Q0158_NCYC1407 rna-Q0158_NCYC1407 Unknown 33.1 33.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H3 GCA_905220325.1 Bioethanol South America HG994156.1:50766-55116:+ gene-Q0158_PE2H3 rna-Q0158_PE2H3 Unknown 97.5 97.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
PE2H4 GCA_905220315.1 Bioethanol South America LR999888.1:50766-55116:+ gene-Q0158_PE2H4 rna-Q0158_PE2H4 Unknown 97.5 97.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
S288C GCF_000146045.2 Laboratory Not applicable NC_001224.1:58009-62447:+ gene-Q0158_S288C rna-Q0158_S288C Unknown 100.0 100.0 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
SA1 GCA_004114265.1 Bioethanol South America SDIA01000049.1:51524-55869:- gene-Q0158_SA1 rna-Q0158_SA1 Unknown 97.7 97.8 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
ThermosaccDry GCA_001738605.1 Bioethanol Asia MBWA01000010.1:47017-49672:+ gene-Q0158_ThermosaccDry rna-Q0158_ThermosaccDry Unknown 58.6 59.2 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding
Sparadoxus GCF_002079055.1 Not applicable Not applicable NC_018044.1:2-2825:+ gene-Q0158_Sparadoxus rna-Q0158_Sparadoxus Unknown 60.3 62.6 Unannotated 1 1 0 Unknown False non_coding non_coding non_coding

Additional files